Pre_GI: BLASTP Hits

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Query: NC_004432:1310322:1334047 Mycoplasma penetrans HF-2, complete genome

Start: 1334047, End: 1334565, Length: 519

Host Lineage: Mycoplasma penetrans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: This strain has been isolated from the tracheal aspirate of a previously healthy HIV-negative patient with severe respiratory symptoms caused by this infection. Causes urogenital and respiratory disease. This genus currently comprises more than 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. The primary habitats of human and animal mycoplasmas are mucous membranes of the respiratory and urogenital tracts, eyes, mammary glands and the joints. Infection that proceeds through attachment of the bacteria to the host cell via specialized surface proteins, adhesins, and subsequent invasion, results in prolonged intracellular persistence that may cause lethality. Once detected in association with their eukaryotic host tissue, most mycoplasmas can be cultivated in the absence of a host if their extremely fastidious growth requirements are met. The latter is one of the major traits that puts them in the separate taxonomic group of microorganisms, class Mollicutes. The cell membrane is rich in protein components (up to two thirds of the membrane mass) that largely consists of highly structurally adaptive lipoproteins employed in invading the host immune system, attachment to the host cells, and pathogenic invasion. Cell division proceeds via normal binary fission or via elongation of a parental cell to form multinucleated filaments and the subsequent breakup to form coccoid bodies.Mycoplasmas carry the smallest genomes of self-replicating cells (less than 500 recognizable coding regions), which is one of the reasons they were among the first microorganisms selected for the genome-sequencing projects. During their evolution, mycoplasmas appear to have lost all of the genes involved in amino acid and cofactor biosynthesis, synthesis of the cell wall and lipid metabolism, resulting in a requirement for the full spectrum of substrates and cofactors taken up from the host or from the complex artificial culture medium. They have lost a number of genes involved in cellular processes, such as cell division, heat shock response, regulatory genes, the two-component signal transduction systems, histidine protein kinases or their target response regulators, and most transcription factors. The majority of mycoplasmas are deficient in genes coding for components of intermediary and energy metabolism and thus are dependent mostly on glycolysis as an ATP-generating pathway. This organism infects humans in the urogenital and respiratory tracts though invasion of tissues. The disease is mainly associated with HIV-1 infection, particularly in the homosexual population, and is very persistent and believed to contribute to the deterioration of the immune system during HIV. Mycoplasma penetrans infection has also been suggested to be a primary cause of some forms of human urethritis and respiratory disease in non-HIV individuals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018664:1795223:181032518103251810837513Clostridium acidurici 9a chromosome, complete genomeadenine phosphoribosyltransferase Apt1e-37155
NC_016012:805680:826493826493827011519Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeadenine phosphoribosyltransferase7e-37152
NC_016627:3205333:324225732422573242772516Clostridium clariflavum DSM 19732 chromosome, complete genomeadenine phosphoribosyltransferase1e-36152
NC_014328:3682000:368578436857843686302519Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeadenine phosphoribosyltransferase2e-36151
NC_010382:3783879:379033837903383790850513Lysinibacillus sphaericus C3-41, complete genomeadenine phosphoribosyltransferase2e-35148
NC_010003:1126800:113457511345751135096522Petrotoga mobilis SJ95, complete genomeadenine phosphoribosyltransferase2e-35148
NC_014330:888366:908289908289908801513Brachyspira pilosicoli 95/1000 chromosome, complete genomeadenine phosphoribosyltransferase2e-35147
NC_018607:2231975:225201922520192252531513Brachyspira pilosicoli B2904 chromosome, complete genomeadenine phosphoribosyltransferase2e-35147
NC_013061:987744:988646988646989173528Pedobacter heparinus DSM 2366, complete genomeadenine phosphoribosyltransferase5e-35146
NC_004722:4333643:434274643427464343258513Bacillus cereus ATCC 14579, complete genomeadenine phosphoribosyltransferase3e-34144
NC_011725:4373721:438598143859814386493513Bacillus cereus B4264 chromosome, complete genomeadenine phosphoribosyltransferase3e-34144
NC_010483:1441614:145626314562631456775513Thermotoga sp. RQ2, complete genomeadenine phosphoribosyltransferase2e-34144
NC_016829:624971:641826641826642347522Mycoplasma hyorhinis GDL-1 chromosome, complete genomeadenine phosphoribosyltransferase6e-34143
NC_014448:626909:643776643776644315540Mycoplasma hyorhinis HUB-1 chromosome, complete genomeAdenine phosphoribosyltransferase7e-34142
NC_013192:171000:176528176528177058531Leptotrichia buccalis DSM 1135, complete genomeadenine phosphoribosyltransferase1e-33142
NC_012806:480297:481136481136481648513Mycoplasma conjunctivae, complete genomeAdenine phosphoribosyltransferase1e-33142
NC_010465:3465351:350000235000023500565564Yersinia pseudotuberculosis YPIII, complete genomeadenine phosphoribosyltransferase9e-33139
NC_009708:3411153:344577234457723446335564Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeadenine phosphoribosyltransferase9e-33139
NC_015177:2642368:264580326458032646336534Pedobacter saltans DSM 12145 chromosome, complete genomeadenine phosphoribosyltransferase8e-33139
NC_015428:823420:827159827159827677519Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeadenine phosphoribosyltransferase6e-33139
NC_008150:2878450:291325729132572913820564Yersinia pestis Antiqua, complete genomeadenine phosphoribosyltransferase2e-32138
NC_009381:3094939:312972831297283130291564Yersinia pestis Pestoides F chromosome, complete genomeadenine phosphoribosyltransferase2e-32138
NC_016513:1859767:187299918729991873610612Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeadenine phosphoribosyltransferase5e-32136
NC_013416:1526920:153784815378481538459612Aggregatibacter actinomycetemcomitans D11S-1, complete genomeadenine phosphoribosyltransferase5e-32136
NC_005125:2887319:291827529182752918790516Gloeobacter violaceus PCC 7421, complete genomeadenine phosphoribosyltransferase3e-31134
NC_013410:3685588:369717236971723697687516Fibrobacter succinogenes subsp. succinogenes S85 chromosome,adenine phosphoribosyltransferase4e-31133
NC_009523:907775:919228919228919746519Roseiflexus sp. RS-1 chromosome, complete genomeadenine phosphoribosyltransferase4e-31133
NC_015966:2337833:235767423576742358207534Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeadenine phosphoribosyltransferase1e-30132
NC_008825:4025705:403078840307884031378591Methylibium petroleiphilum PM1, complete genomeadenine phosphoribosyltransferase8e-31132
NC_009257:151737:166436166436166963528Francisella tularensis subsp. tularensis WY96-3418 chromosome,adenine phosphoribosyltransferase2e-30131
NC_008312:666287:685183685183685695513Trichodesmium erythraeum IMS101, complete genomeadenine phosphoribosyltransferase2e-30131
NC_007517:1561466:158966115896611590176516Geobacter metallireducens GS-15, complete genomeadenine phosphoribosyltransferase4e-30130
NC_008245:66852:815518155182078528Francisella tularensis subsp. tularensis FSC 198, complete genomeadenine phosphoribosyltransferase3e-30130
NC_008601:1733940:174340817434081743935528Francisella tularensis subsp. novicida U112, complete genomeadenine phosphoribosyltransferase3e-30130
NC_016933:66854:815538155382080528Francisella tularensis TIGB03 chromosome, complete genomeAdenine phosphoribosyltransferase3e-30130
NC_016937:66854:815538155382080528Francisella tularensis subsp. tularensis TI0902 chromosome,Adenine phosphoribosyltransferase3e-30130
NC_015224:1391088:139108813910881391651564Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,adenine phosphoribosyltransferase1e-29129
NC_009483:3024115:304237030423703042885516Geobacter uraniireducens Rf4 chromosome, complete genomeadenine phosphoribosyltransferase1e-29129
NC_007880:1703346:171276917127691713296528Francisella tularensis subsp. holarctica, complete genomeadenine phosphoribosyltransferase1e-29129
NC_009749:1699152:170866817086681709195528Francisella tularensis subsp. holarctica FTA, complete genomeadenine phosphoribosyltransferase1e-29129
NC_008369:1702885:171240117124011712928528Francisella tularensis subsp. holarctica OSU18, complete genomeadenine phosphoribosyltransferase1e-29129
NC_007498:1666242:167832416783241678860537Pelobacter carbinolicus DSM 2380, complete genomeadenine/guanine phosphoribosyltransferase2e-29128
NC_013222:1659619:169224816922481692760513Robiginitalea biformata HTCC2501, complete genomeadenine phosphoribosyltransferase2e-29128
NC_008800:3330944:336582033658203366383564Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,adenine phosphoribosyltransferase2e-29128
NC_014752:617987:618821618821619420600Neisseria lactamica ST-640, complete genomeadenine phosphoribosyltransferase1e-29128
NC_015731:2460248:249023124902312490758528Nitrosomonas sp. Is79A3 chromosome, complete genomeAdenine phosphoribosyltransferase3e-29127
NC_007908:4677856:470654347065434707127585Rhodoferax ferrireducens T118, complete genomeadenine phosphoribosyltransferase7e-29126
NC_008710:819389:825910825910826455546Borrelia turicatae 91E135, complete genomeadenine phosphoribosyltransferase1e-28125
NC_009441:3522519:352456335245633525075513Flavobacterium johnsoniae UW101 chromosome, complete genomeadenine phosphoribosyltransferase1e-28125
NC_014311:3076519:312632431263243126917594Ralstonia solanacearum PSI07 chromosome, complete genomeadenine phosphoribosyltransferase1e-28125
NC_016932:1246235:126544612654461266051606Corynebacterium pseudotuberculosis 316 chromosome, complete genomeAdenine phosphoribosyltransferase3e-28124
NC_012918:1814000:181677218167721817287516Geobacter sp. M21 chromosome, complete genomeadenine phosphoribosyltransferase3e-28124
NC_007802:3252300:325602032560203256559540Jannaschia sp. CCS1, complete genomeadenine phosphoribosyltransferase2e-28124
NC_011146:3089297:310632131063213106836516Geobacter bemidjiensis Bem, complete genomeadenine phosphoribosyltransferase4e-28123
NC_013174:1459730:146222714622271462763537Jonesia denitrificans DSM 20603, complete genomeadenine phosphoribosyltransferase2e-27122
NC_014329:1261480:128070812807081281313606Corynebacterium pseudotuberculosis FRC41 chromosome, completeadenine phosphoribosyltransferase1e-27122
NC_017031:1261289:128051712805171281122606Corynebacterium pseudotuberculosis P54B96 chromosome, completeAdenine phosphoribosyltransferase1e-27122
NC_017300:1258861:127809012780901278695606Corynebacterium pseudotuberculosis 1002 chromosome, completeAdenine phosphoribosyltransferase1e-27122
NC_017301:1261167:128039612803961281001606Corynebacterium pseudotuberculosis C231 chromosome, completeAdenine phosphoribosyltransferase1e-27122
NC_017303:1261311:128053912805391281144606Corynebacterium pseudotuberculosis I19 chromosome, complete genomeAdenine phosphoribosyltransferase1e-27122
NC_017305:1258840:127806812780681278673606Corynebacterium pseudotuberculosis PAT10 chromosome, completeAdenine phosphoribosyltransferase1e-27122
NC_016781:1261300:128052812805281281085558Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeadenine phosphoribosyltransferase8e-28122
NC_008027:1847040:187155318715531872101549Pseudomonas entomophila L48, complete genomeadenine phosphoribosyltransferase3e-27120
NC_010501:3987615:398761539876153988163549Pseudomonas putida W619, complete genomeadenine phosphoribosyltransferase5e-27120
NC_002932:296557:304941304941305474534Chlorobium tepidum TLS, complete genomeadenine phosphoribosyltransferase1e-26119
NC_002935:1378566:138708813870881387642555Corynebacterium diphtheriae NCTC 13129, complete genomeadenine phosphoribosyltransferase1e-26119
NC_016787:1350676:135450713545071355061555Corynebacterium diphtheriae HC03 chromosome, complete genomeadenine phosphoribosyltransferase1e-26119
NC_016790:1319060:133057513305751331129555Corynebacterium diphtheriae VA01 chromosome, complete genomeadenine phosphoribosyltransferase1e-26119
NC_016785:1321700:134091313409131341467555Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeadenine phosphoribosyltransferase2e-26118
NC_016799:1343020:141475314147531415307555Corynebacterium diphtheriae 31A chromosome, complete genomeadenine phosphoribosyltransferase2e-26118
NC_012803:1519138:152381215238121524333522Micrococcus luteus NCTC 2665, complete genomeadenine phosphoribosyltransferase5e-26117
NC_016800:1378728:138789413878941388448555Corynebacterium diphtheriae BH8 chromosome, complete genomeadenine phosphoribosyltransferase3e-26117
NC_016788:1349500:135801113580111358565555Corynebacterium diphtheriae HC04 chromosome, complete genomeadenine phosphoribosyltransferase3e-26117
NC_016782:1359000:136143213614321361986555Corynebacterium diphtheriae 241 chromosome, complete genomeadenine phosphoribosyltransferase2e-26117
NC_016786:1359064:136140213614021361956555Corynebacterium diphtheriae HC01 chromosome, complete genomeadenine phosphoribosyltransferase2e-26117
NC_016802:1317365:136022313602231360777555Corynebacterium diphtheriae HC02 chromosome, complete genomeadenine phosphoribosyltransferase2e-26117
NC_016783:1374464:138361013836101384164555Corynebacterium diphtheriae INCA 402 chromosome, complete genomeadenine phosphoribosyltransferase6e-26116
NC_016789:1334514:140511014051101405664555Corynebacterium diphtheriae PW8 chromosome, complete genomeadenine phosphoribosyltransferase6e-26116
NC_016801:1361597:140443014044301404984555Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeadenine phosphoribosyltransferase6e-26116
NC_009720:3281000:328615632861563286692537Xanthobacter autotrophicus Py2, complete genome2e-25114
NC_004917:1323783:132378313237831324319537Helicobacter hepaticus ATCC 51449, complete genomeadenine phosphoribosyltransferase2e-24111
NC_014006:2999500:303573430357343036282549Sphingobium japonicum UT26S chromosome 1, complete genomeadenine phosphoribosyltransferase3e-24111
NC_015580:141379:147879147879148415537Novosphingobium sp. PP1Y, complete genomeadenine phosphoribosyltransferase5e-24110
NC_007577:1047000:104861910486191049131513Prochlorococcus marinus str. MIT 9312, complete genomeAdenine phosphoribosyltransferase1e-21102
NC_009442:908507:929348929348929875528Streptococcus suis 05ZYH33 chromosome, complete genomeadenine phosphoribosyltransferase2e-0962
NC_013967:2103968:210740221074022107947546Haloferax volcanii DS2 chromosome, complete genomeadenine phosphoribosyltransferase2e-0755.5
NC_019978:91483:967949679497618825Halobacteroides halobius DSM 5150, complete genomepur operon repressor1e-0652.8