Pre_GI: BLASTP Hits

Some Help

Query: NC_004088:266543:277774 Yersinia pestis KIM, complete genome

Start: 277774, End: 277998, Length: 225

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4265659:426870742687074268931225Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-37152
NC_017168:1631052:164947516494751649699225Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-37152
NC_009381:222735:241137241137241361225Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-37152
NC_005810:4469156:448058144805814480805225Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-37152
NC_008149:4053363:406459540645954064819225Yersinia pestis Nepal516, complete genomehypothetical protein5e-37152
NC_014228:2883500:289921528992152899535321Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-1785.5
NC_013892:1272448:128445512844551284775321Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-1684.7
NC_014228:2883500:289206628920662892386321Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-1683.6
NC_013421:4714478:473476847347684735001234Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF1813 HSP20-like protein8e-1682.4
NC_013421:4714478:472112447211244721315192Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF1813 HSP20-like protein4e-1580.1
NC_014228:1336466:134019513401951340548354Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein5e-1579.7
NC_012962:1068102:108993910899391090262324Photorhabdus asymbiotica, complete genomeputative endoribonuclease SymE24e-1476.6
NC_012962:1068102:109771210977121098035324Photorhabdus asymbiotica, complete genomeputative endoribonuclease SymE34e-1476.6
NC_005126:4333767:437341543734154373642228Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1373.2
NC_012962:1068102:108243110824311082754324Photorhabdus asymbiotica, complete genomeputative endoribonuclease SymE9e-1372.4
NC_012962:1068102:110472011047201105043324Photorhabdus asymbiotica, complete genomeputative endoribonuclease SymE49e-1372.4
NC_013592:4511478:452653845265384526759222Dickeya dadantii Ech586, complete genomeDomain of unknown function DUF1813 HSP20-like protein5e-1269.7
NC_004547:3817656:382111538211153821444330Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-0857
NC_004547:3817656:382804538280453828374330Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-0857
NC_014562:1883517:189358918935891893822234Pantoea vagans C9-1 chromosome, complete genomehypothetical protein6e-0856.2
NC_013421:4714478:473109947310994731233135Pectobacterium wasabiae WPP163, complete genome1e-0755.5
NC_013421:2613137:263011926301192630457339Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF1813 HSP20-like protein5e-0753.1
NC_014228:2883500:288362528836252883954330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein5e-0753.1
NC_013421:385930:395782395782395901120Pectobacterium wasabiae WPP163, complete genome9e-0752.4
NC_013421:385930:397256397256397375120Pectobacterium wasabiae WPP163, complete genome9e-0752.4
NC_013421:4714478:473646847364684736590123Pectobacterium wasabiae WPP163, complete genome8e-0649.3