Pre_GI: BLASTP Hits

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Query: NC_003143:3583468:3599354 Yersinia pestis CO92, complete genome

Start: 3599354, End: 3599581, Length: 228

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3375463:339169433916943391921228Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-27120
NC_010465:3597000:361207936120793612306228Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF5392e-27120
NC_006155:1074298:107863810786381078865228Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-27120
NC_010634:1056441:106078110607811061008228Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-27120
NC_010159:3502350:351826435182643518491228Yersinia pestis Angola, complete genomehypothetical protein2e-27120
NC_008149:1002453:100600010060001006227228Yersinia pestis Nepal516, complete genomehypothetical protein2e-27120
NC_008150:3015000:303103230310323031259228Yersinia pestis Antiqua, complete genomehypothetical protein2e-27120
NC_005810:754340:758737758737758964228Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-27120
NC_009381:3228500:324361832436183243845228Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-27120
NC_009708:3542336:355822235582223558449228Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-27120
NC_017168:2158839:216238621623862162613228Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-27120
NC_020063:3690308:375219537521953752410216Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein4e-1890.1
NC_010506:4404377:440560544056054405829225Shewanella woodyi ATCC 51908, complete genomeprotein of unknown function DUF5392e-1064.7
NC_015276:2852010:285460228546022854835234Marinomonas mediterranea MMB-1 chromosome, complete genomeprotein of unknown function DUF5397e-0649.3