Pre_GI: BLASTN Hits

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Query: NC_021182:2192718 Clostridium pasteurianum BC1, complete genome

Start: 2192718, End: 2216463, Length: 23746

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008593:1704207*1704207172452320317Clostridium novyi NT, complete genome0739BLASTN svgBLASTP svg
NC_020291:1014333*1014333103759923267Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome0648BLASTN svgBLASTP svg
NC_010520:3204480*3204480322378019301Clostridium botulinum A3 str. Loch Maree, complete genome2e-146527BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome4e-144519BLASTN svgBLASTP svg
NC_012563:3374904*3374904339859023687Clostridium botulinum A2 str. Kyoto, complete genome2e-139504BLASTN svgBLASTP svg
NC_008261:2524913*2524913254259917687Clostridium perfringens ATCC 13124, complete genome9e-96359BLASTN svgBLASTP svg
NC_021182:2667408*2667408269011022703Clostridium pasteurianum BC1, complete genome3e-49204BLASTN svgBLASTP svg
NC_003869:94800094800097076722768Thermoanaerobacter tengcongensis MB4, complete genome9e-25123BLASTN svgBLASTP svg
NC_016012:879972*87997290262722656Candidatus Arthromitus sp. SFB-rat-Yit, complete genome3e-21111BLASTN svgBLASTP svg
NC_013517:82510082510084990924810Sebaldella termitidis ATCC 33386, complete genome2e-19105BLASTN svgBLASTP svg
NC_005061:96536*9653614201245477Candidatus Blochmannia floridanus, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_006833:637964*63796465659918636Wolbachia endosymbiont strain TRS of Brugia malayi, complete3e-1591.7BLASTN svgBLASTP svg
NC_014004:66631*666318870622076Candidatus Sulcia muelleri DMIN chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013515:14834711483471150341619946Streptobacillus moniliformis DSM 12112, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010001:2836995*2836995286257025576Clostridium phytofermentans ISDg, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013454:229587*22958725413424548Blattabacterium sp. (Blattella germanica) str. Bge, complete2e-1385.7BLASTN svgBLASTP svg
NC_014499:87528*8752810905021523Candidatus Sulcia muelleri CARI chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_009850:2169459*2169459220320233744Arcobacter butzleri RM4018, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_020134:2193900*2193900221445220553Clostridium stercorarium subsp. stercorarium DSM 8532, complete2e-1075.8BLASTN svgBLASTP svg
NC_014751:449001*44900146805619056Mycoplasma leachii PG50 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007633:446899*44689946595419056Mycoplasma capricolum subsp. capricolum ATCC 27343, complete3e-0971.9BLASTN svgBLASTP svg
NC_014802:716699*71669974120824510Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_014150:1*11978219782Brachyspira murdochii DSM 12563 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008787:685401*68540171140226002Campylobacter jejuni subsp. jejuni 81-176, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005303:780557*78055780913328577Onion yellows phytoplasma OY-M, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003912:767500*76750079119123692Campylobacter jejuni RM1221, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002163:687925*68792571274724823Campylobacter jejuni subsp. jejuni NCTC 11168, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_000963:20554620554622772522180Rickettsia prowazekii str. Madrid E, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015499:19794519794521851920575Thermodesulfobium narugense DSM 14796 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011999:1320159*1320159133954619388Macrococcus caseolyticus JCSC5402, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015682:736746*73674676603529290Thermodesulfobacterium sp. OPB45 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014721:1629063*1629063165209923037Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete7e-0763.9BLASTN svgBLASTP svg
NC_002620:803696*80369682802824333Chlamydia muridarum Nigg, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014758:245707*24570726409918393Calditerrivibrio nitroreducens DSM 19672 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_009012:1595498*1595498161817522678Clostridium thermocellum ATCC 27405, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006833:1011537*1011537105506743531Wolbachia endosymbiont strain TRS of Brugia malayi, complete3e-0661.9BLASTN svgBLASTP svg