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Query: NC_017249:8427163 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8427163, End: 8469358, Length: 42196

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:17725411772541179709924559Bradyrhizobium japonicum USDA 110, complete genome029980BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome04040BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome02698BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome01657BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome01643BLASTN svgBLASTP svg
NC_004463:21180002118000214009922100Bradyrhizobium japonicum USDA 110, complete genome0728BLASTN svgBLASTP svg
NC_004463:90313319031331904979018460Bradyrhizobium japonicum USDA 110, complete genome2e-178634BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome1e-176628BLASTN svgBLASTP svg
NC_020453:93639693639697628939894Agromonas oligotrophica S58 DNA, complete genome8e-119436BLASTN svgBLASTP svg
NC_012586:92209592209594950427410Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence2e-107398BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome2e-88335BLASTN svgBLASTP svg
NC_010524:67421667421670822934014Leptothrix cholodnii SP-6, complete genome3e-66262BLASTN svgBLASTP svg
NC_010524:25308412530841255411423274Leptothrix cholodnii SP-6, complete genome3e-66262BLASTN svgBLASTP svg
NC_011894:63826366382636641559932964Methylobacterium nodulans ORS 2060, complete genome2e-57232BLASTN svgBLASTP svg
NC_014100:533322*53332256190028579Caulobacter segnis ATCC 21756 chromosome, complete genome9e-57230BLASTN svgBLASTP svg
NC_002977:11984381198438121974121304Methylococcus capsulatus str. Bath, complete genome6e-55224BLASTN svgBLASTP svg
NC_004463:90872909087290911099923710Bradyrhizobium japonicum USDA 110, complete genome2e-54222BLASTN svgBLASTP svg
NC_008702:39280433928043395047222430Azoarcus sp. BH72, complete genome8e-48200BLASTN svgBLASTP svg
NC_005070:41926141926147386554605Synechococcus sp. WH 8102, complete genome3e-44188BLASTN svgBLASTP svg
NC_007489:42500425006678724288Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence7e-39170BLASTN svgBLASTP svg
NC_013173:36793263679326373266253337Desulfomicrobium baculatum DSM 4028, complete genome3e-38168BLASTN svgBLASTP svg
NC_007517:1468719*1468719150798939271Geobacter metallireducens GS-15, complete genome7e-36161BLASTN svgBLASTP svg
NC_008825:28899332889933292316233230Methylibium petroleiphilum PM1, complete genome1e-34157BLASTN svgBLASTP svg
NC_010814:15516241551624162182670203Geobacter lovleyi SZ, complete genome4e-34155BLASTN svgBLASTP svg
NC_011145:49609404960940498025219313Anaeromyxobacter sp. K, complete genome4e-31145BLASTN svgBLASTP svg
NC_013173:2884887*2884887293159946713Desulfomicrobium baculatum DSM 4028, complete genome2e-30143BLASTN svgBLASTP svg
NC_015138:10160001016000103760521606Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-30143BLASTN svgBLASTP svg
NC_004463:57224685722468574221819751Bradyrhizobium japonicum USDA 110, complete genome7e-30141BLASTN svgBLASTP svg
NC_010067:80712980712983359926471Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-28137BLASTN svgBLASTP svg
NC_011901:2202690*2202690223230229613Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete4e-28135BLASTN svgBLASTP svg
NC_008781:3365468*3365468340127235805Polaromonas naphthalenivorans CJ2, complete genome6e-27131BLASTN svgBLASTP svg
NC_007925:42944724294472431768023209Rhodopseudomonas palustris BisB18, complete genome4e-25125BLASTN svgBLASTP svg
NC_007760:49111814911181493806026880Anaeromyxobacter dehalogenans 2CP-C, complete genome6e-24121BLASTN svgBLASTP svg
NC_007908:1328832*1328832136532136490Rhodoferax ferrireducens T118, complete genome6e-24121BLASTN svgBLASTP svg
NC_004463:22624672262467231174249276Bradyrhizobium japonicum USDA 110, complete genome2e-23119BLASTN svgBLASTP svg
NC_015125:24439452443945246359819654Microbacterium testaceum StLB037, complete genome6e-21111BLASTN svgBLASTP svg
NC_011740:21351412135141215307917939Escherichia fergusonii ATCC 35469, complete genome9e-20107BLASTN svgBLASTP svg
NC_010994:57362*573628068223321Rhizobium etli CIAT 652, complete genome4e-19105BLASTN svgBLASTP svg
NC_010994:85950085950087980320304Rhizobium etli CIAT 652, complete genome4e-19105BLASTN svgBLASTP svg
NC_015976:10648881064888109285227965Sphingobium sp. SYK-6, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_011894:6418000*6418000644309925100Methylobacterium nodulans ORS 2060, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_011883:48718748718751019523009Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,2e-1799.6BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_011886:2950411*2950411298659936189Arthrobacter chlorophenolicus A6, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_014664:26695622669562269113921578Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_014933:32510003251000327098419985Bacteroides helcogenes P 36-108 chromosome, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_011992:57100057100058859917600Acidovorax ebreus TPSY, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012691:22250002225000224630921310Tolumonas auensis DSM 9187, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_009937:53082530827690623825Azorhizobium caulinodans ORS 571, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008686:1592073*1592073161599123919Paracoccus denitrificans PD1222 chromosome 1, complete sequence2e-1489.7BLASTN svgBLASTP svg
NC_007761:781210*78121081014728938Rhizobium etli CFN 42, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_008268:5781604*5781604581424432641Rhodococcus sp. RHA1, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_014963:55800055800058218424185Terriglobus saanensis SP1PR4 chromosome, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_014816:23570002357000239416937170Asticcacaulis excentricus CB 48 chromosome 1, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_004463:84010608401060845309952040Bradyrhizobium japonicum USDA 110, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015145:2942500*2942500296157319074Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_014394:13736021373602140662533024Gallionella capsiferriformans ES-2 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011004:2507566*2507566253137523810Rhodopseudomonas palustris TIE-1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007958:2423335*2423335244565022316Rhodopseudomonas palustris BisB5, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007406:33540003354000337855624557Nitrobacter winogradskyi Nb-255, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_012560:5276000*5276000530340327404Azotobacter vinelandii DJ, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_021150:5234000*5234000526129527296Azotobacter vinelandii CA6, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_000962:16840051684005170853924535Mycobacterium tuberculosis H37Rv, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007406:26159162615916263852322608Nitrobacter winogradskyi Nb-255, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009525:16855221685522171115225631Mycobacterium tuberculosis H37Ra, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009565:16886421688642171216323522Mycobacterium tuberculosis F11, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_009667:2860818*2860818288999929182Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_009937:43501324350132437409923968Azorhizobium caulinodans ORS 571, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013959:2892660*2892660292827535616Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_014973:24300024300026234519346Geobacter sp. M18 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015848:17081761708176173271724542Mycobacterium canettii CIPT 140010059, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_019950:16899101689910171687926970Mycobacterium canettii CIPT 140060008 complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008609:3732192*3732192377050638315Pelobacter propionicus DSM 2379, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_002755:16841611684161170880524645Mycobacterium tuberculosis CDC1551, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008027:58427405842740587100528266Pseudomonas entomophila L48, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010725:5491491*5491491552462633136Methylobacterium populi BJ001, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010804:996837996837104668249846Burkholderia multivorans ATCC 17616 chromosome 1, complete5e-0971.9BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete5e-0971.9BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete5e-0971.9BLASTN svgBLASTP svg
NC_008541:3282415*3282415330766425250Arthrobacter sp. FB24 chromosome 1, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_011979:2352961*2352961238357030610Geobacter sp. FRC-32, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_011386:3723019*3723019374899925981Oligotropha carboxidovorans OM5, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_011004:11748131174813119811023298Rhodopseudomonas palustris TIE-1, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008313:31124403112440314759935160Ralstonia eutropha H16 chromosome 1, complete sequence8e-0867.9BLASTN svgBLASTP svg
NC_003295:19935419935423823938886Ralstonia solanacearum GMI1000, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_004463:18497184974626527769Bradyrhizobium japonicum USDA 110, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011206:25491322549132259129842167Acidithiobacillus ferrooxidans ATCC 53993, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_004431:23839012383901241472630826Escherichia coli CFT073, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007086:42934054293405431133917935Xanthomonas campestris pv. campestris str. 8004, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007958:498549852839523411Rhodopseudomonas palustris BisB5, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008343:2589680*2589680261333023651Granulibacter bethesdensis CGDNIH1, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008536:9538891*9538891958717848288Solibacter usitatus Ellin6076, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010623:18714921871492194209470603Burkholderia phymatum STM815 chromosome 2, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_011769:34013533401353342520623854Desulfovibrio vulgaris str. 'Miyazaki F', complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014923:26720002672000269164419645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete5e-0661.9BLASTN svgBLASTP svg
NC_015376:36313923631392365107419683Burkholderia gladioli BSR3 chromosome chromosome 2, complete5e-0661.9BLASTN svgBLASTP svg
NC_015675:28390002839000285961920620Mesorhizobium opportunistum WSM2075 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_019973:27440002744000276369719698Mesorhizobium australicum WSM2073, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_003902:71447871447874861534138Xanthomonas campestris pv. campestris str. ATCC 33913, complete5e-0661.9BLASTN svgBLASTP svg