Pre_GI: BLASTN Hits

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Query: NC_016445:2593800 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2593800, End: 2625855, Length: 32056

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002505:16853216853220059932068Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete049670BLASTN svgBLASTP svg
NC_015633:33800033800035668318684Vibrio anguillarum 775 chromosome chromosome I, complete sequence05705BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome3e-34155BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome1e-30143BLASTN svgBLASTP svg
NC_014541:41679164167916419249724582Ferrimonas balearica DSM 9799 chromosome, complete genome5e-30141BLASTN svgBLASTP svg
CP002185:38224703822470385930636837Escherichia coli W, complete genome2e-29139BLASTN svgBLASTP svg
CP002516:24676724676726745320687Escherichia coli KO11, complete genome2e-29139BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-29139BLASTN svgBLASTP svg
NC_004741:41320564132056415578223727Shigella flexneri 2a str. 2457T, complete genome2e-29139BLASTN svgBLASTP svg
NC_007384:38970003897000391653419535Shigella sonnei Ss046, complete genome2e-29139BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome5e-27131BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome5e-27131BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome5e-27131BLASTN svgBLASTP svg
NC_009800:3685651*3685651370909923449Escherichia coli HS, complete genome5e-27131BLASTN svgBLASTP svg
NC_010468:23100023100025334622347Escherichia coli ATCC 8739, complete genome5e-27131BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome5e-27131BLASTN svgBLASTP svg
NC_010634:44637274463727449917835452Yersinia pseudotuberculosis PB1/+, complete genome5e-27131BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome5e-27131BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome3e-25125BLASTN svgBLASTP svg
NC_014121:50000695000069503057530507Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-22115BLASTN svgBLASTP svg
NC_010498:38384193838419386683628418Escherichia coli SMS-3-5, complete genome1e-21113BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome5e-21111BLASTN svgBLASTP svg
NC_009348:1064664*1064664109873434071Aeromonas salmonicida subsp. salmonicida A449, complete genome2e-20109BLASTN svgBLASTP svg
NC_011751:40745864074586409524320658Escherichia coli UMN026 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_009778:41880004188000423044042441Enterobacter sakazakii ATCC BAA-894, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_013416:875758*87575890109925342Aggregatibacter actinomycetemcomitans D11S-1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008258:35815833581583360816926587Shigella flexneri 5 str. 8401, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_006905:37173063717306374009922794Salmonella enterica subsp. enterica serovar Choleraesuis str2e-1489.7BLASTN svgBLASTP svg
NC_004337:36219853621985364626824284Shigella flexneri 2a str. 301, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013960:45249345249347193019438Nitrosococcus halophilus Nc4 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_009801:39569173956917397533818422Escherichia coli E24377A, complete genome1e-0973.8BLASTN svgBLASTP svg
CU928160:37090813709081373009921019Escherichia coli IAI1 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
AP010958:43134624313462433479021329Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-0973.8BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_012912:40718594071859411755145693Dickeya zeae Ech1591, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_018419:22600022600024809922100Secondary endosymbiont of Ctenarytaina eucalypti chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_013416:386301*38630140838122081Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008322:46110004611000462903818039Shewanella sp. MR-7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008309:84207284207286931527244Haemophilus somnus 129PT, complete genome1e-0663.9BLASTN svgBLASTP svg