Pre_GI: BLASTN Hits

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Query: NC_014323:1 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 1, End: 16108, Length: 16108

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015856:112197121971Collimonas fungivorans Ter331 chromosome, complete genome01027BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome0743BLASTN svgBLASTP svg
NC_012724:1*11851018510Burkholderia glumae BGR1 chromosome 1, complete genome0712BLASTN svgBLASTP svg
NC_008313:113975239752Ralstonia eutropha H16 chromosome 1, complete sequence0672BLASTN svgBLASTP svg
NC_007347:1*12859628596Ralstonia eutropha JMP134 chromosome 1, complete sequence4e-171609BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome4e-168599BLASTN svgBLASTP svg
NC_010682:112474724747Ralstonia pickettii 12J chromosome 1, complete sequence2e-163583BLASTN svgBLASTP svg
NC_009076:75535*7553510652630992Burkholderia pseudomallei 1106a chromosome I, complete sequence8e-160571BLASTN svgBLASTP svg
NC_010681:111969219692Burkholderia phytofirmans PsJN chromosome 1, complete sequence1e-140507BLASTN svgBLASTP svg
NC_014722:115359353593Burkholderia rhizoxinica HKI 454, complete genome2e-120440BLASTN svgBLASTP svg
NC_015138:111600416004Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-116426BLASTN svgBLASTP svg
NC_015422:111870118701Alicycliphilus denitrificans K601 chromosome, complete genome7e-111408BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome2e-102381BLASTN svgBLASTP svg
NC_015677:112102721027Ramlibacter tataouinensis TTB310 chromosome, complete genome2e-98367BLASTN svgBLASTP svg
NC_011662:114205242052Thauera sp. MZ1T, complete genome1e-93351BLASTN svgBLASTP svg
NC_008702:111506115061Azoarcus sp. BH72, complete genome9e-92345BLASTN svgBLASTP svg
NC_016002:111459914599Pseudogulbenkiania sp. NH8B, complete genome2e-80307BLASTN svgBLASTP svg
NC_010804:52000*520007319121192Burkholderia multivorans ATCC 17616 chromosome 1, complete8e-80305BLASTN svgBLASTP svg
NC_005085:111651116511Chromobacterium violaceum ATCC 12472, complete genome2e-71278BLASTN svgBLASTP svg
NC_006513:16954871695487172039324907Azoarcus sp. EbN1, complete genome3e-67264BLASTN svgBLASTP svg
NC_007958:498549852839523411Rhodopseudomonas palustris BisB5, complete genome8e-46192BLASTN svgBLASTP svg
NC_014733:2851984*2851984287799926016Methylovorus sp. MP688 chromosome, complete genome5e-41176BLASTN svgBLASTP svg
NC_013854:31263853126385315026623882Azospirillum sp. B510, complete genome1e-38168BLASTN svgBLASTP svg
NC_002516:6255854*6255854627999924146Pseudomonas aeruginosa PAO1, complete genome1e-38168BLASTN svgBLASTP svg
NC_020209:4768500*4768500481226743768Pseudomonas poae RE*1-1-14, complete genome3e-30141BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome6e-28133BLASTN svgBLASTP svg
NC_015572:115300753007Methylomonas methanica MC09 chromosome, complete genome2e-27131BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-25125BLASTN svgBLASTP svg
NC_002947:8394*83945373745344Pseudomonas putida KT2440, complete genome4e-23117BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome1e-22115BLASTN svgBLASTP svg
NC_013165:3146000*3146000318049934500Slackia heliotrinireducens DSM 20476, complete genome1e-22115BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome1e-22115BLASTN svgBLASTP svg
NC_015731:111668216682Nitrosomonas sp. Is79A3 chromosome, complete genome2e-21111BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome9e-21109BLASTN svgBLASTP svg
NC_014844:35826773582677360568023004Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome6e-19103BLASTN svgBLASTP svg
NC_013204:3613824*3613824364749933676Eggerthella lenta DSM 2243, complete genome2e-18101BLASTN svgBLASTP svg
NC_013595:10329633*103296331035599926367Streptosporangium roseum DSM 43021, complete genome1e-1695.6BLASTN svgBLASTP svg
NC_014318:369136912533921649Amycolatopsis mediterranei U32 chromosome, complete genome8e-1589.7BLASTN svgBLASTP svg
NC_010814:409940992609221994Geobacter lovleyi SZ, complete genome8e-1589.7BLASTN svgBLASTP svg
NC_009092:4585784*4585784461549929716Shewanella loihica PV-4, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_010611:3879190*3879190390849929310Acinetobacter baumannii ACICU, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_015389:2101841*2101841212999928159Coriobacterium glomerans PW2 chromosome, complete genome5e-1383.8BLASTN svgBLASTP svg
NC_014972:37716423771642379462522984Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_007164:2446879*2446879247349926621Corynebacterium jeikeium K411, complete genome3e-1177.8BLASTN svgBLASTP svg
NC_008711:4579997*4579997460549925503Arthrobacter aurescens TC1, complete genome3e-1177.8BLASTN svgBLASTP svg
NC_009952:3522370*3522370356180439435Dinoroseobacter shibae DFL 12, complete genome3e-1177.8BLASTN svgBLASTP svg
NC_010172:5447189*5447189548599938811Methylobacterium extorquens PA1, complete genome3e-1177.8BLASTN svgBLASTP svg
NC_011757:5742290*5742290578349941210Methylobacterium chloromethanicum CM4, complete genome3e-1177.8BLASTN svgBLASTP svg
NC_012803:3691*36914264438954Micrococcus luteus NCTC 2665, complete genome3e-1177.8BLASTN svgBLASTP svg
NC_018531:4718904*4718904474449925596Arthrobacter sp. Rue61a chromosome, complete genome3e-1177.8BLASTN svgBLASTP svg
NC_011886:4376261*4376261440799931739Arthrobacter chlorophenolicus A6, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_008601:631504*63150465482423321Francisella tularensis subsp. novicida U112, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014210:5752651*5752651577999927349Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,5e-1073.8BLASTN svgBLASTP svg
NC_020260:3931567*3931567395659925033Cronobacter sakazakii Sp291, complete genome5e-1073.8BLASTN svgBLASTP svg
NC_015145:4232283*4232283426249930217Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_008576:4701930*4701930473149929570Magnetococcus sp. MC-1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_007333:111820218202Thermobifida fusca YX, complete genome8e-0969.9BLASTN svgBLASTP svg
NC_007333:3626510*3626510365399927490Thermobifida fusca YX, complete genome8e-0969.9BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome8e-0969.9BLASTN svgBLASTP svg
NC_014151:4106624*4106624413399927376Cellulomonas flavigena DSM 20109 chromosome, complete genome8e-0969.9BLASTN svgBLASTP svg
NC_006570:529426*52942655446125036Francisella tularensis subsp. tularensis Schu 4, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_007880:1456705*1456705148081024106Francisella tularensis subsp. holarctica, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_008245:529378*52937855441325036Francisella tularensis subsp. tularensis FSC 198, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_011979:4293859*4293859431999926141Geobacter sp. FRC-32, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_013510:1*11865618656Thermomonospora curvata DSM 43183, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_015942:31851933185193321099925807Acidithiobacillus ferrivorans SS3 chromosome, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_018665:1*12938529385Exiguobacterium antarcticum B7 chromosome, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_018750:3964784*3964784398396119178Streptomyces venezuelae ATCC 10712, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013714:570329*57032959295822630Bifidobacterium dentium Bd1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013521:4240468*4240468426799927532Sanguibacter keddieii DSM 10542, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_000918:707801*70780173055422754Aquifex aeolicus VF5, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009952:749426*74942677238922964Dinoroseobacter shibae DFL 12, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_013093:111124311243Actinosynnema mirum DSM 43827, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_014363:2035141*2035141206649931359Olsenella uli DSM 7084 chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_015677:27159122715912274137925468Ramlibacter tataouinensis TTB310 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015067:2371428*2371428239399922572Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014550:3839389*3839389387099931611Arthrobacter arilaitensis Re117, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010816:1660066*1660066168402823963Bifidobacterium longum DJO10A, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007498:3655304*3655304367749922196Pelobacter carbinolicus DSM 2380, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008541:4679022*4679022470999930978Arthrobacter sp. FB24 chromosome 1, complete sequence7e-0660BLASTN svgBLASTP svg