Pre_GI: BLASTN Hits

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Query: NC_013929:5248000 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5248000, End: 5270099, Length: 22100

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome02026BLASTN svgBLASTP svg
NC_003155:49066394906639493178025142Streptomyces avermitilis MA-4680, complete genome01996BLASTN svgBLASTP svg
NC_003888:4377000*4377000439557918580Streptomyces coelicolor A3(2), complete genome0977BLASTN svgBLASTP svg
NC_003155:5163382*5163382518745824077Streptomyces avermitilis MA-4680, complete genome0882BLASTN svgBLASTP svg
NC_015953:3782302*3782302381186629565Streptomyces sp. SirexAA-E chromosome, complete genome1e-119438BLASTN svgBLASTP svg
NC_021177:4124839*4124839415343928601Streptomyces fulvissimus DSM 40593, complete genome1e-106394BLASTN svgBLASTP svg
NC_018750:43330644333064436046827405Streptomyces venezuelae ATCC 10712, complete genome6e-72280BLASTN svgBLASTP svg
NC_003155:3652587*3652587369577343187Streptomyces avermitilis MA-4680, complete genome2e-71278BLASTN svgBLASTP svg
NC_021177:3997727*3997727401925421528Streptomyces fulvissimus DSM 40593, complete genome2e-62248BLASTN svgBLASTP svg
NC_010572:3925803*3925803395628730485Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-61244BLASTN svgBLASTP svg
NC_003888:6103534*6103534615544651913Streptomyces coelicolor A3(2), complete genome2e-56228BLASTN svgBLASTP svg
NC_003888:5790104*5790104582064330540Streptomyces coelicolor A3(2), complete genome5e-54220BLASTN svgBLASTP svg
NC_021177:4258102*4258102427958121480Streptomyces fulvissimus DSM 40593, complete genome1e-51212BLASTN svgBLASTP svg
NC_010572:41814034181403420609924697Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-50208BLASTN svgBLASTP svg
NC_003888:36027533602753362646223710Streptomyces coelicolor A3(2), complete genome2e-47198BLASTN svgBLASTP svg
NC_013235:17615391761539178059919061Nakamurella multipartita DSM 44233, complete genome2e-38168BLASTN svgBLASTP svg
NC_014830:13179*131794609932921Intrasporangium calvum DSM 43043 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_014165:925009250011009917600Thermobispora bispora DSM 43833 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_013595:9547254*9547254957863931386Streptosporangium roseum DSM 43021, complete genome8e-22113BLASTN svgBLASTP svg
NC_015434:5411*54112875223342Verrucosispora maris AB-18-032 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_013093:1213908*1213908124337529468Actinosynnema mirum DSM 43827, complete genome2e-19105BLASTN svgBLASTP svg
NC_014830:3275474*3275474329809922626Intrasporangium calvum DSM 43043 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_013510:5115500*5115500514328527786Thermomonospora curvata DSM 43183, complete genome3e-18101BLASTN svgBLASTP svg
NC_015312:5876957*5876957590027923323Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015312:55790785579078560145622379Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_014210:72371972371974915525437Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,5e-1797.6BLASTN svgBLASTP svg
NC_014815:6779538*6779538680255323016Micromonospora sp. L5 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013729:2157785*2157785219409936315Kribbella flavida DSM 17836, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013093:1411882*1411882143830226421Actinosynnema mirum DSM 43827, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013510:39975*399756221822244Thermomonospora curvata DSM 43183, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_018750:3661243*3661243368475823516Streptomyces venezuelae ATCC 10712, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015957:1070500*1070500110058130082Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015434:228912*22891225262723716Verrucosispora maris AB-18-032 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013595:15150015150017859927100Streptosporangium roseum DSM 43021, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014391:16188*161884462128434Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019673:8581000*8581000860834127342Saccharothrix espanaensis DSM 44229 complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014210:14403614403616380119766Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,7e-1073.8BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011992:77390577390579750923605Acidovorax ebreus TPSY, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019673:8799533*8799533883442634894Saccharothrix espanaensis DSM 44229 complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014484:591291*59129160937118081Spirochaeta thermophila DSM 6192 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015635:81150081150083636724868Microlunatus phosphovorus NM-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019673:1275627*1275627131011934493Saccharothrix espanaensis DSM 44229 complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021177:20347222034722205851023789Streptomyces fulvissimus DSM 40593, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015138:11430151143015116543022416Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-0661.9BLASTN svgBLASTP svg