Pre_GI: BLASTN Hits

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Query: NC_013716:4885776 Citrobacter rodentium ICC168, complete genome

Start: 4885776, End: 4905627, Length: 19852

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020063:528296*52829655507326778Enterobacteriaceae bacterium strain FGI 57, complete genome04258BLASTN svgBLASTP svg
NC_015968:4117835*4117835416711149277Enterobacter asburiae LF7a chromosome, complete genome03622BLASTN svgBLASTP svg
NC_012880:3915500*3915500393874123242Dickeya dadantii Ech703, complete genome0823BLASTN svgBLASTP svg
NC_004129:957890*95789098009922210Pseudomonas fluorescens Pf-5, complete genome4e-85323BLASTN svgBLASTP svg
NC_021150:4311902*4311902433613524234Azotobacter vinelandii CA6, complete genome6e-78299BLASTN svgBLASTP svg
NC_012560:4311906*4311906433613924234Azotobacter vinelandii DJ, complete genome6e-78299BLASTN svgBLASTP svg
NC_008702:1514707*1514707153954024834Azoarcus sp. BH72, complete genome5e-60240BLASTN svgBLASTP svg
NC_010524:3094303*3094303311453120229Leptothrix cholodnii SP-6, complete genome6e-50206BLASTN svgBLASTP svg
NC_013159:38584253858425388459926175Saccharomonospora viridis DSM 43017, complete genome9e-43182BLASTN svgBLASTP svg
NC_015186:491930*49193052445732528Acidiphilium multivorum AIU301, complete genome1e-35159BLASTN svgBLASTP svg
NC_009654:1123709*1123709114240218694Marinomonas sp. MWYL1, complete genome2e-31145BLASTN svgBLASTP svg
NC_018678:554675*55467557858523911Alteromonas macleodii str. 'English Channel 673' chromosome,1e-23119BLASTN svgBLASTP svg
NC_014972:10351241035124106227327150Desulfobulbus propionicus DSM 2032 chromosome, complete genome7e-22113BLASTN svgBLASTP svg
NC_015125:1136734*1136734116252925796Microbacterium testaceum StLB037, complete genome7e-22113BLASTN svgBLASTP svg
NC_013199:2536705*2536705255640419700Lactobacillus rhamnosus Lc 705, complete genome1e-20109BLASTN svgBLASTP svg
NC_015388:16780001678000170390225903Desulfobacca acetoxidans DSM 11109 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_015161:2018493*2018493204698428492Deinococcus proteolyticus MRP chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_014039:334892*33489235832823437Propionibacterium acnes SK137 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_006085:30856730856732922620660Propionibacterium acnes KPA171202, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013416:939668*93966896270723040Aggregatibacter actinomycetemcomitans D11S-1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007498:1148249*1148249117610427856Pelobacter carbinolicus DSM 2380, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014151:657382*65738267905121670Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002932:296557*29655731908122525Chlorobium tepidum TLS, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020075:114790*11479013461719828Candidatus Blochmannia chromaiodes str. 640, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007292:11339611339613533421939Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008463:5364428*5364428539303028603Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009513:303043*30304332423321191Lactobacillus reuteri F275, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004310:1777721*1777721180601328293Brucella suis 1330 chromosome I, complete sequence6e-1073.8BLASTN svgBLASTP svg
NC_006932:1795500*1795500182178126282Brucella abortus biovar 1 str. 9-941 chromosome I, complete6e-1073.8BLASTN svgBLASTP svg
NC_007618:1792500*1792500182000027501Brucella melitensis biovar Abortus 2308 chromosome I, complete6e-1073.8BLASTN svgBLASTP svg
NC_009667:1076718*1076718109886222145Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence6e-1073.8BLASTN svgBLASTP svg
NC_010103:1777000*1777000180418827189Brucella canis ATCC 23365 chromosome I, complete sequence6e-1073.8BLASTN svgBLASTP svg
NC_010167:1287000*1287000131378426785Brucella suis ATCC 23445 chromosome II, complete sequence6e-1073.8BLASTN svgBLASTP svg
NC_010742:1794000*1794000181909925100Brucella abortus S19 chromosome 1, complete sequence6e-1073.8BLASTN svgBLASTP svg
NC_014909:86000*8600012150135502Candidatus Blochmannia vafer str. BVAF chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015857:1809500*1809500183566226163Brucella pinnipedialis B2/94 chromosome chromosome 1, complete6e-1073.8BLASTN svgBLASTP svg
NC_012559:2854640*2854640288043025791Laribacter hongkongensis HLHK9, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_008497:556365*55636557476918405Lactobacillus brevis ATCC 367, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015942:25444072544407256835223946Acidithiobacillus ferrivorans SS3 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009053:10816511081651111181130161Actinobacillus pleuropneumoniae L20, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_020126:61906626190662621411323452Myxococcus stipitatus DSM 14675, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007929:1397989*1397989142649328505Lactobacillus salivarius subsp. salivarius UCC118, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003317:190975*19097521627025296Brucella melitensis 16M chromosome I, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_007516:891681*89168191532523645Synechococcus sp. CC9605, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008095:5312926*5312926533428921364Myxococcus xanthus DK 1622, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013851:24414072441407246552624120Allochromatium vinosum DSM 180 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015711:72654397265439729106325625Myxococcus fulvus HW-1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012691:31265003126500315237825879Tolumonas auensis DSM 9187, complete genome9e-0660BLASTN svgBLASTP svg
NC_008783:177161*17716121209934939Bartonella bacilliformis KC583, complete genome9e-0660BLASTN svgBLASTP svg
NC_005139:2731623*2731623275419322571Vibrio vulnificus YJ016 chromosome I, complete sequence9e-0660BLASTN svgBLASTP svg