Pre_GI: BLASTN Hits

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Query: NC_012792:962292 Variovorax paradoxus S110 chromosome 2, complete genome

Start: 962292, End: 990683, Length: 28392

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010002:30023543002354302560623253Delftia acidovorans SPH-1, complete genome01312BLASTN svgBLASTP svg
NC_003295:21117302111730213127819549Ralstonia solanacearum GMI1000, complete genome0959BLASTN svgBLASTP svg
NC_008390:24483792448379247019921821Burkholderia cepacia AMMD chromosome 1, complete sequence1e-172615BLASTN svgBLASTP svg
NC_009078:510525*51052554399133467Burkholderia pseudomallei 1106a chromosome II, complete sequence1e-135492BLASTN svgBLASTP svg
NC_007435:2352954*2352954238639233439Burkholderia pseudomallei 1710b chromosome II, complete sequence3e-133484BLASTN svgBLASTP svg
NC_009075:587441*58744162177434334Burkholderia pseudomallei 668 chromosome II, complete sequence2e-128468BLASTN svgBLASTP svg
NC_007650:2429307*2429307246662437318Burkholderia thailandensis E264 chromosome II, complete sequence6e-122446BLASTN svgBLASTP svg
NC_014153:21874092187409221140623998Thiomonas intermedia K12 chromosome, complete genome5e-67264BLASTN svgBLASTP svg
NC_010002:1879220*1879220196064881429Delftia acidovorans SPH-1, complete genome3e-65258BLASTN svgBLASTP svg
NC_008782:19176341917634194559927966Acidovorax sp. JS42, complete genome7e-63250BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_008781:654289*65428967826423976Polaromonas naphthalenivorans CJ2, complete genome4e-21111BLASTN svgBLASTP svg
NC_009142:25655612565561258937023810Saccharopolyspora erythraea NRRL 2338, complete genome6e-20107BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome1e-18103BLASTN svgBLASTP svg
NC_008314:47772247772252609948378Ralstonia eutropha H16 chromosome 2, complete sequence4e-18101BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-1799.6BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010682:28841528841531019821784Ralstonia pickettii 12J chromosome 1, complete sequence6e-1797.6BLASTN svgBLASTP svg
NC_012560:42019694201969423232530357Azotobacter vinelandii DJ, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_015387:1803938*1803938184009936162Marinithermus hydrothermalis DSM 14884 chromosome, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_021150:42019654201965423232130357Azotobacter vinelandii CA6, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_014391:42154742154744451422968Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011662:38616238616243991353752Thauera sp. MZ1T, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_002607:742886*74288677209929214Halobacterium sp. NRC-1, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_007333:3360000*3360000337759917600Thermobifida fusca YX, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010364:733558*73355876240228845Halobacterium salinarum R1, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012560:3505235*3505235352968824454Azotobacter vinelandii DJ, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_021150:3505234*3505234352968724454Azotobacter vinelandii CA6, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009439:31040003104000312885524856Pseudomonas mendocina ymp, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008741:15699156993810522407Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,2e-1385.7BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_020181:3585898*3585898362589840001Enterobacter aerogenes EA1509E, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007794:2839239*2839239287591536677Novosphingobium aromaticivorans DSM 12444, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_003296:14088914088916133820450Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-1179.8BLASTN svgBLASTP svg
NC_001263:2461941*2461941248301921079Deinococcus radiodurans R1 chromosome 1, complete sequence6e-1177.8BLASTN svgBLASTP svg
NC_007948:3541987*3541987356359921613Polaromonas sp. JS666, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008702:25205002520500255173231233Azoarcus sp. BH72, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014924:25170682517068254012823061Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015666:1849618*1849618187832428707Halopiger xanaduensis SH-6 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008340:77420677420679412919924Alkalilimnicola ehrlichei MLHE-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004547:1683593*1683593172730343711Erwinia carotovora subsp. atroseptica SCRI1043, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_015563:46294364629436465219622761Delftia sp. Cs1-4 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010557:31600031600033917223173Burkholderia ambifaria MC40-6 chromosome 3, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_008027:36775003677500369685019351Pseudomonas entomophila L48, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009720:2424975*2424975244520720233Xanthobacter autotrophicus Py2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014831:20823042082304211433932036Thermaerobacter marianensis DSM 12885 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015424:2357600*2357600239563038031Aeromonas veronii B565 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014323:43552664355266437857423309Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_012791:46805004680500470001919520Variovorax paradoxus S110 chromosome 1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008095:5585346*5585346562741242067Myxococcus xanthus DK 1622, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_006677:435652*43565246548229831Gluconobacter oxydans 621H, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003911:4001094*4001094403346532372Silicibacter pomeroyi DSS-3, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008095:14286651428665145887430210Myxococcus xanthus DK 1622, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011901:24663602466360251915552796Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_012721:26948292694829272122926401Burkholderia glumae BGR1 chromosome 2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014837:38786838786841433626469Pantoea sp. At-9b chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015379:24829012482901250376220862Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_016002:2946702*2946702299376147060Pseudogulbenkiania sp. NH8B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020126:3383902*3383902342138737486Myxococcus stipitatus DSM 14675, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008095:86987668698766872823629471Myxococcus xanthus DK 1622, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009092:26441642644164266929125128Shewanella loihica PV-4, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014532:29891852989185301261923435Halomonas elongata DSM 2581, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015315:79579979579982151125713Thermoproteus uzoniensis 768-20 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006139:31500315007199740498Desulfotalea psychrophila LSv54 plasmid large, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009937:673820*67382070064926830Azorhizobium caulinodans ORS 571, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010678:11400011400013688322884Ralstonia pickettii 12J chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_012857:55791155791157959921689Ralstonia pickettii 12D chromosome 2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013440:84057198405719843059924881Haliangium ochraceum DSM 14365, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013446:21649742164974219310328130Comamonas testosteroni CNB-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014623:94920009492000951423622237Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015711:57091057091059864327734Myxococcus fulvus HW-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-0661.9BLASTN svgBLASTP svg