Query: NC_012207:2573562 Mycobacterium bovis BCG str. Tokyo 172, complete genome
Start: 2573562, End: 2597329, Length: 23768
Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Used for the production of BCG vaccine in Japan. Causative agent of classic bovine tuberculosis. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced. The pathology in cows is similar to the pathology of Mycobacterium tuberculosis in humans, with pulmonary TB leading to chronic debilitation, coughing, and further systemic spread to other organs. In addition, 1 to 2% of infected cows develop mycobacterial mastitis that results in shedding of the bacteria into the milk.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015848:2684275* | 2684275 | 2705286 | 21012 | Mycobacterium canettii CIPT 140010059, complete genome | 0 | 1102 | BLASTN svg | BLASTP svg |
NC_009525:2635792* | 2635792 | 2658641 | 22850 | Mycobacterium tuberculosis H37Ra, complete genome | 0 | 1033 | BLASTN svg | BLASTP svg |
NC_010612:4501414* | 4501414 | 4524992 | 23579 | Mycobacterium marinum M, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
NC_002944:1285436 | 1285436 | 1321324 | 35889 | Mycobacterium avium subsp. paratuberculosis K-10, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_013235:2129982* | 2129982 | 2172185 | 42204 | Nakamurella multipartita DSM 44233, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_013093:1411882* | 1411882 | 1438302 | 26421 | Actinosynnema mirum DSM 43827, complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_002944:1881405 | 1881405 | 1904640 | 23236 | Mycobacterium avium subsp. paratuberculosis K-10, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_010612:90890* | 90890 | 114750 | 23861 | Mycobacterium marinum M, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_013757:1732747* | 1732747 | 1750641 | 17895 | Geodermatophilus obscurus DSM 43160, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_013159:1422370* | 1422370 | 1441599 | 19230 | Saccharomonospora viridis DSM 43017, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_020133:77341 | 77341 | 99270 | 21930 | Mycobacterium liflandii 128FXT, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_015957:8677395* | 8677395 | 8707779 | 30385 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_006177:1254635 | 1254635 | 1281529 | 26895 | Symbiobacterium thermophilum IAM 14863, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_020133:4911044 | 4911044 | 4936099 | 25056 | Mycobacterium liflandii 128FXT, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_010612:5301135 | 5301135 | 5327018 | 25884 | Mycobacterium marinum M, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_002944:4163490 | 4163490 | 4199728 | 36239 | Mycobacterium avium subsp. paratuberculosis K-10, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_014393:4541000* | 4541000 | 4566440 | 25441 | Clostridium cellulovorans 743B chromosome, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_021177:2241647* | 2241647 | 2266498 | 24852 | Streptomyces fulvissimus DSM 40593, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_014393:3425694* | 3425694 | 3471417 | 45724 | Clostridium cellulovorans 743B chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_012483:483425* | 483425 | 532099 | 48675 | Acidobacterium capsulatum ATCC 51196, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_008578:889907* | 889907 | 922194 | 32288 | Acidothermus cellulolyticus 11B, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010397:4150596* | 4150596 | 4181959 | 31364 | Mycobacterium abscessus chromosome Chromosome, complete sequence | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014328:4471995* | 4471995 | 4502155 | 30161 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014328:711842* | 711842 | 735717 | 23876 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_005125:839000* | 839000 | 861717 | 22718 | Gloeobacter violaceus PCC 7421, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010804:2206000* | 2206000 | 2228934 | 22935 | Burkholderia multivorans ATCC 17616 chromosome 1, complete | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010612:6113155 | 6113155 | 6132654 | 19500 | Mycobacterium marinum M, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_011027:136954* | 136954 | 158553 | 21600 | Chlorobaculum parvum NCIB 8327, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014935:1047411* | 1047411 | 1071672 | 24262 | Nitratifractor saLSUginis DSM 16511 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_020133:5710661 | 5710661 | 5732244 | 21584 | Mycobacterium liflandii 128FXT, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015671:2371632* | 2371632 | 2394615 | 22984 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012207:831030 | 831030 | 853609 | 22580 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011896:1380000 | 1380000 | 1405880 | 25881 | Mycobacterium leprae Br4923, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_002945:831029 | 831029 | 853656 | 22628 | Mycobacterium bovis AF2122/97, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_002677:1380000 | 1380000 | 1405852 | 25853 | Mycobacterium leprae TN, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |