Pre_GI: BLASTN Hits

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Query: NC_012207:2573562 Mycobacterium bovis BCG str. Tokyo 172, complete genome

Start: 2573562, End: 2597329, Length: 23768

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Used for the production of BCG vaccine in Japan. Causative agent of classic bovine tuberculosis. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced. The pathology in cows is similar to the pathology of Mycobacterium tuberculosis in humans, with pulmonary TB leading to chronic debilitation, coughing, and further systemic spread to other organs. In addition, 1 to 2% of infected cows develop mycobacterial mastitis that results in shedding of the bacteria into the milk.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015848:2684275*2684275270528621012Mycobacterium canettii CIPT 140010059, complete genome01102BLASTN svgBLASTP svg
NC_009525:2635792*2635792265864122850Mycobacterium tuberculosis H37Ra, complete genome01033BLASTN svgBLASTP svg
NC_010612:4501414*4501414452499223579Mycobacterium marinum M, complete genome3e-46194BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome2e-25125BLASTN svgBLASTP svg
NC_013235:2129982*2129982217218542204Nakamurella multipartita DSM 44233, complete genome5e-23117BLASTN svgBLASTP svg
NC_013093:1411882*1411882143830226421Actinosynnema mirum DSM 43827, complete genome3e-21111BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome5e-20107BLASTN svgBLASTP svg
NC_010612:90890*9089011475023861Mycobacterium marinum M, complete genome2e-19105BLASTN svgBLASTP svg
NC_013757:1732747*1732747175064117895Geodermatophilus obscurus DSM 43160, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013159:1422370*1422370144159919230Saccharomonospora viridis DSM 43017, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_020133:77341773419927021930Mycobacterium liflandii 128FXT, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015957:8677395*8677395870777930385Streptomyces violaceusniger Tu 4113 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_006177:12546351254635128152926895Symbiobacterium thermophilum IAM 14863, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020133:49110444911044493609925056Mycobacterium liflandii 128FXT, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010612:53011355301135532701825884Mycobacterium marinum M, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014393:4541000*4541000456644025441Clostridium cellulovorans 743B chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_021177:2241647*2241647226649824852Streptomyces fulvissimus DSM 40593, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014393:3425694*3425694347141745724Clostridium cellulovorans 743B chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012483:483425*48342553209948675Acidobacterium capsulatum ATCC 51196, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008578:889907*88990792219432288Acidothermus cellulolyticus 11B, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010397:4150596*4150596418195931364Mycobacterium abscessus chromosome Chromosome, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_014328:4471995*4471995450215530161Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014328:711842*71184273571723876Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005125:839000*83900086171722718Gloeobacter violaceus PCC 7421, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010804:2206000*2206000222893422935Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-0765.9BLASTN svgBLASTP svg
NC_010612:61131556113155613265419500Mycobacterium marinum M, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011027:136954*13695415855321600Chlorobaculum parvum NCIB 8327, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014935:1047411*1047411107167224262Nitratifractor saLSUginis DSM 16511 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020133:57106615710661573224421584Mycobacterium liflandii 128FXT, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015671:2371632*2371632239461522984Cellvibrio gilvus ATCC 13127 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012207:83103083103085360922580Mycobacterium bovis BCG str. Tokyo 172, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011896:13800001380000140588025881Mycobacterium leprae Br4923, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002945:83102983102985365622628Mycobacterium bovis AF2122/97, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002677:13800001380000140585225853Mycobacterium leprae TN, complete genome3e-0661.9BLASTN svgBLASTP svg