Pre_GI: BLASTN Hits

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Query: NC_010501:1518959 Pseudomonas putida W619, complete genome

Start: 1518959, End: 1543335, Length: 24377

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome0654BLASTN svgBLASTP svg
NC_002947:19886521988652202146032809Pseudomonas putida KT2440, complete genome4e-172613BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome1e-88335BLASTN svgBLASTP svg
NC_007005:10362431036243106363927397Pseudomonas syringae pv. syringae B728a, complete genome2e-68268BLASTN svgBLASTP svg
NC_005773:11353741135374117481539442Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-56228BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome5e-54220BLASTN svgBLASTP svg
NC_015424:16895001689500172544435945Aeromonas veronii B565 chromosome, complete genome2e-47198BLASTN svgBLASTP svg
NC_020209:5077410*5077410511615938750Pseudomonas poae RE*1-1-14, complete genome4e-39170BLASTN svgBLASTP svg
NC_009512:43754524375452440539429943Pseudomonas putida F1, complete genome4e-33151BLASTN svgBLASTP svg
NC_009348:14759551475955153571059756Aeromonas salmonicida subsp. salmonicida A449, complete genome2e-32149BLASTN svgBLASTP svg
NC_020064:15475241547524158410636583Serratia marcescens FGI94, complete genome4e-30141BLASTN svgBLASTP svg
NC_009648:26997392699739273776838030Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-26129BLASTN svgBLASTP svg
NC_014500:14916601491660151533923680Dickeya dadantii 3937 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_008340:2614000*2614000263940025401Alkalilimnicola ehrlichei MLHE-1, complete genome9e-25123BLASTN svgBLASTP svg
NC_009778:11417161141716117336531650Enterobacter sakazakii ATCC BAA-894, complete genome4e-24121BLASTN svgBLASTP svg
NC_008321:1523323*1523323156037837056Shewanella sp. MR-4, complete genome1e-23119BLASTN svgBLASTP svg
NC_008781:36889653688965371374824784Polaromonas naphthalenivorans CJ2, complete genome9e-22113BLASTN svgBLASTP svg
NC_020260:11841741184174121484630673Cronobacter sakazakii Sp291, complete genome9e-22113BLASTN svgBLASTP svg
NC_020211:554736*55473659042335688Serratia marcescens WW4, complete genome3e-21111BLASTN svgBLASTP svg
NC_008260:10154471015447103954324097Alcanivorax borkumensis SK2, complete genome5e-20107BLASTN svgBLASTP svg
NC_006513:88112088112091309931980Azoarcus sp. EbN1, complete genome5e-20107BLASTN svgBLASTP svg
NC_005773:5149768*5149768521141661649Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-18101BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_011894:43605774360577439709936523Methylobacterium nodulans ORS 2060, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009800:21560912156091218719031100Escherichia coli HS, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013716:22551022255102228502629925Citrobacter rodentium ICC168, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_014837:2803447*2803447283151828072Pantoea sp. At-9b chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010682:66127266127268656525294Ralstonia pickettii 12J chromosome 1, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_009052:33819433381943341170229760Shewanella baltica OS155, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008577:15799501579950160290022951Shewanella sp. ANA-3 chromosome 1, complete sequence8e-1693.7BLASTN svgBLASTP svg
NC_011992:57100057100058859917600Acidovorax ebreus TPSY, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_012560:15645001564500159380029301Azotobacter vinelandii DJ, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015677:89667389667391821221540Ramlibacter tataouinensis TTB310 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_011662:2402408*2402408242621923812Thauera sp. MZ1T, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014562:20499212049921207971629796Pantoea vagans C9-1 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007951:74050074050076287822379Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_007973:29520042952004297379621793Ralstonia metallidurans CH34 chromosome 1, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_013959:2892660*2892660292827535616Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012791:82137182137185170230332Variovorax paradoxus S110 chromosome 1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009720:39681013968101399101722917Xanthobacter autotrophicus Py2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005071:87907*8790714203654130Prochlorococcus marinus str. MIT 9313, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_001264:28266282666040532140Deinococcus radiodurans R1 chromosome 2, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_008390:81857181857184350924939Burkholderia cepacia AMMD chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_010508:93386293386296238928528Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_013446:4723380*4723380475330129922Comamonas testosteroni CNB-2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013446:3147202*3147202318258835387Comamonas testosteroni CNB-2, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010804:67108167108170545734377Burkholderia multivorans ATCC 17616 chromosome 1, complete8e-1073.8BLASTN svgBLASTP svg
NC_019940:33417943341794336057818785Thioflavicoccus mobilis 8321 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010725:45119394511939454748235544Methylobacterium populi BJ001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007086:42934054293405431133917935Xanthomonas campestris pv. campestris str. 8004, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003902:71447871447874861534138Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0971.9BLASTN svgBLASTP svg
NC_005027:13048871304887132660221716Rhodopirellula baltica SH 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006834:78750078750081555228053Xanthomonas oryzae pv. oryzae KACC10331, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007705:75594875594878101525068Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010717:4626178*4626178465282826651Xanthomonas oryzae pv. oryzae PXO99A, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007298:13348761334876136112026245Dechloromonas aromatica RCB, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_006511:85478585478589509940315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC5e-0867.9BLASTN svgBLASTP svg
NC_006350:31951653195165321400518841Burkholderia pseudomallei K96243 chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_006348:20717492071749209535023602Burkholderia mallei ATCC 23344 chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_004631:86200286200289659934598Salmonella enterica subsp. enterica serovar Typhi Ty2, complete5e-0867.9BLASTN svgBLASTP svg
NC_003305:17439391743939177259928661Agrobacterium tumefaciens str. C58 chromosome linear, complete5e-0867.9BLASTN svgBLASTP svg
NC_003198:21097752109775214492235148Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-0867.9BLASTN svgBLASTP svg
NC_007434:34529853452985347302220038Burkholderia pseudomallei 1710b chromosome I, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007651:16625581662558168442221865Burkholderia thailandensis E264 chromosome I, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_008785:91441191441194029125881Burkholderia mallei SAVP1 chromosome II, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_003063:30496230496233428329322Agrobacterium tumefaciens str. C58 chromosome linear, complete5e-0867.9BLASTN svgBLASTP svg
NC_011080:21616962161696219837536680Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-0867.9BLASTN svgBLASTP svg
NC_010102:86186086186089518233323Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-0867.9BLASTN svgBLASTP svg
NC_009080:18157681815768183436818601Burkholderia mallei NCTC 10247 chromosome II, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_009076:30451393045139306397918841Burkholderia pseudomallei 1106a chromosome I, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_009074:30297163029716304855618841Burkholderia pseudomallei 668 chromosome I, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_008836:27803392780339280541925081Burkholderia mallei NCTC 10229 chromosome II, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007347:76745576745579935531901Ralstonia eutropha JMP134 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008313:31124403112440314759935160Ralstonia eutropha H16 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010831:2078329*2078329211792139593Chlorobium phaeobacteroides BS1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007508:4283750*4283750431638632637Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007760:49111814911181493806026880Anaeromyxobacter dehalogenans 2CP-C, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007952:14530001453000147986226863Burkholderia xenovorans LB400 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_008343:88184*8818411285024667Granulibacter bethesdensis CGDNIH1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010551:84695384695386809921147Burkholderia ambifaria MC40-6 chromosome 1, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_011891:49319614931961494959917639Anaeromyxobacter dehalogenans 2CP-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015856:940625*94062598805147427Collimonas fungivorans Ter331 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019973:50694995069499509210422606Mesorhizobium australicum WSM2073, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_005070:61744861744864381626369Synechococcus sp. WH 8102, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010816:18524061852406187962927224Bifidobacterium longum DJO10A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011083:22006132200613223455433942Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-0661.9BLASTN svgBLASTP svg
NC_014972:54414654414658609941954Desulfobulbus propionicus DSM 2032 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015052:21815142181514221381832305Bifidobacterium longum subsp. infantis 157F, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015152:38950038950042209932600Spirochaeta sp. Buddy chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003197:21529942152994218696633973Salmonella typhimurium LT2, complete genome3e-0661.9BLASTN svgBLASTP svg