Pre_GI: BLASTN Hits

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Query: NC_009831:3612206 Shewanella sediminis HAW-EB3, complete genome

Start: 3612206, End: 3654039, Length: 41834

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009831:35838563583856360600922154Shewanella sediminis HAW-EB3, complete genome01572BLASTN svgBLASTP svg
NC_009092:15995261599526164486445339Shewanella loihica PV-4, complete genome1e-117432BLASTN svgBLASTP svg
NC_008345:3394154*3394154341832224169Shewanella frigidimarina NCIMB 400, complete genome2e-54222BLASTN svgBLASTP svg
NC_010334:1783500*1783500181555632057Shewanella halifaxensis HAW-EB4, complete genome2e-30143BLASTN svgBLASTP svg
NC_010939:1633000*1633000166140328404Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete3e-26129BLASTN svgBLASTP svg
NC_005139:30542030542033120425785Vibrio vulnificus YJ016 chromosome I, complete sequence2e-23119BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome2e-23119BLASTN svgBLASTP svg
NC_014012:16769831676983170572328741Shewanella violacea DSS12, complete genome2e-23119BLASTN svgBLASTP svg
NC_011753:20617820617823311626939Vibrio splendidus LGP32 chromosome 1, complete genome1e-22117BLASTN svgBLASTP svg
NC_007946:22318722231872226061428743Escherichia coli UTI89, complete genome4e-22115BLASTN svgBLASTP svg
NC_009783:16656101665610168785322244Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence2e-21113BLASTN svgBLASTP svg
NC_013166:96143196143198377922349Kangiella koreensis DSM 16069, complete genome6e-21111BLASTN svgBLASTP svg
NC_015740:1017000*1017000104061723618Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete6e-21111BLASTN svgBLASTP svg
NC_021066:46029246029251915858867Raoultella ornithinolytica B6, complete genome6e-21111BLASTN svgBLASTP svg
NC_011750:10349191034919106622831310Escherichia coli IAI39 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome2e-20109BLASTN svgBLASTP svg
NC_021150:1258780*1258780127736818589Azotobacter vinelandii CA6, complete genome9e-20107BLASTN svgBLASTP svg
NC_012560:1260031*1260031129243132401Azotobacter vinelandii DJ, complete genome9e-20107BLASTN svgBLASTP svg
NC_006511:85478585478589509940315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-19105BLASTN svgBLASTP svg
NC_004631:86200286200289659934598Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-19105BLASTN svgBLASTP svg
NC_003198:21097752109775214492235148Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-19105BLASTN svgBLASTP svg
NC_003197:21529942152994218696633973Salmonella typhimurium LT2, complete genome4e-19105BLASTN svgBLASTP svg
NC_007954:3171081*3171081321159940519Shewanella denitrificans OS217, complete genome4e-19105BLASTN svgBLASTP svg
NC_009901:1693500*1693500173209938600Shewanella pealeana ATCC 700345, complete genome4e-19105BLASTN svgBLASTP svg
NC_010102:86186086186089518233323Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-19105BLASTN svgBLASTP svg
NC_011080:21616962161696219837536680Salmonella enterica subsp. enterica serovar Newport str. SL254,4e-19105BLASTN svgBLASTP svg
NC_011083:22006132200613223455433942Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-19105BLASTN svgBLASTP svg
NC_011149:21108612110861214483233972Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-19105BLASTN svgBLASTP svg
NC_013416:16214691621469165023328765Aggregatibacter actinomycetemcomitans D11S-1, complete genome4e-19105BLASTN svgBLASTP svg
NC_009434:1156834*1156834117518418351Pseudomonas stutzeri A1501, complete genome1e-18103BLASTN svgBLASTP svg
NC_016002:2946702*2946702299376147060Pseudogulbenkiania sp. NH8B, complete genome6e-18101BLASTN svgBLASTP svg
NC_010473:29639512963951298843424484Escherichia coli str. K-12 substr. DH10B, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_009800:28899282889928291209922172Escherichia coli HS, complete genome2e-1799.6BLASTN svgBLASTP svg
AC_000091:28720002872000289652624527Escherichia coli W3110 DNA, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_014532:15794191579419162013440716Halomonas elongata DSM 2581, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_015633:41358741358744184328257Vibrio anguillarum 775 chromosome chromosome I, complete sequence4e-1695.6BLASTN svgBLASTP svg
NC_010468:1029471*1029471105499125521Escherichia coli ATCC 8739, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_013592:713036*71303676182148786Dickeya dadantii Ech586, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_013850:985331985331100742022090Klebsiella variicola At-22 chromosome, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_009997:35831663583166360265419489Shewanella baltica OS195, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_004337:20987362098736212859929864Shigella flexneri 2a str. 301, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_007606:19998701999870202709927230Shigella dysenteriae Sd197, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_009053:1668500*1668500169468326184Actinobacillus pleuropneumoniae L20, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_006370:18108421810842183457523734Photobacterium profundum SS9 chromosome 1, complete sequence1e-1283.8BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_008577:15799501579950160290022951Shewanella sp. ANA-3 chromosome 1, complete sequence5e-1281.8BLASTN svgBLASTP svg
NC_009801:22761312276131230753131401Escherichia coli E24377A, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome5e-1281.8BLASTN svgBLASTP svg
AP010958:25040722504072253559331522Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014666:40432794043279406262719349Frankia sp. EuI1c chromosome, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_008563:21822702182270221156429295Escherichia coli APEC O1, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_007963:19089641908964193444325480Chromohalobacter salexigens DSM 3043, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_014562:2563466*2563466261248449019Pantoea vagans C9-1 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_010468:17750001775000180518230183Escherichia coli ATCC 8739, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013169:19414101941410196745126042Kytococcus sedentarius DSM 20547, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014121:33996853399685343519435510Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-0973.8BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_012214:15885731588573162042231850Erwinia pyrifoliae Ep1/96, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_011059:18965931896593192809931507Prosthecochloris aestuarii DSM 271, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_004603:23000023000025659726598Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete5e-0971.9BLASTN svgBLASTP svg
NC_007969:72608672608675476528680Psychrobacter cryohalolentis K5, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_005966:69689696899119521507Acinetobacter sp. ADP1, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008321:1523323*1523323156037837056Shewanella sp. MR-4, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_013961:2260250*2260250228983729588Erwinia amylovora, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_010814:15516241551624162182670203Geobacter lovleyi SZ, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007984:22103022103024292321894Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete3e-0765.9BLASTN svgBLASTP svg
NC_006350:1084930*1084930112191036981Burkholderia pseudomallei K96243 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_018419:22600022600024809922100Secondary endosymbiont of Ctenarytaina eucalypti chromosome,1e-0663.9BLASTN svgBLASTP svg
NC_020126:3383902*3383902342138737486Myxococcus stipitatus DSM 14675, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_013422:16041571604157162347719321Halothiobacillus neapolitanus c2, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009052:33819433381943341170229760Shewanella baltica OS155, complete genome5e-0661.9BLASTN svgBLASTP svg