Pre_GI: BLASTN Hits

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Query: NC_009656:5505413 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 5505413, End: 5537599, Length: 32187

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012857:10974001097400112349826099Ralstonia pickettii 12D chromosome 2, complete genome06070BLASTN svgBLASTP svg
NC_002516:77678777678780223925453Pseudomonas aeruginosa PAO1, complete genome04121BLASTN svgBLASTP svg
NC_006856:26438*264384625619819Salmonella enterica subsp. enterica serovar Choleraesuis str02575BLASTN svgBLASTP svg
NC_011083:15243371524337154332418988Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,02575BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome02575BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome02575BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete02575BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete02575BLASTN svgBLASTP svg
NC_014836:29195082919508294399924492Desulfurispirillum indicum S5 chromosome, complete genome02553BLASTN svgBLASTP svg
NC_008463:43421194342119436920327085Pseudomonas aeruginosa UCBPP-PA14, complete genome02409BLASTN svgBLASTP svg
NC_003384:10903610903613209923064Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid02387BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome02379BLASTN svgBLASTP svg
NC_009651:19909199094332823420Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,02371BLASTN svgBLASTP svg
NC_007337:10464104643241121948Ralstonia eutropha JMP134 plasmid 1, complete sequence02074BLASTN svgBLASTP svg
NC_011770:45421834542183456916026978Pseudomonas aeruginosa LESB58, complete genome02054BLASTN svgBLASTP svg
NC_013446:27610002761000280309942100Comamonas testosteroni CNB-2, complete genome01889BLASTN svgBLASTP svg
NC_014006:18620001862000188907327074Sphingobium japonicum UT26S chromosome 1, complete genome01746BLASTN svgBLASTP svg
NC_003919:28240002824000285062126622Xanthomonas axonopodis pv. citri str. 306, complete genome01229BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid2e-78301BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome1e-58236BLASTN svgBLASTP svg
NC_015410:3502099*3502099352815926061Pseudomonas mendocina NK-01 chromosome, complete genome5e-58234BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome3e-56228BLASTN svgBLASTP svg
NC_015942:72298072298074620423225Acidithiobacillus ferrivorans SS3 chromosome, complete genome2e-51212BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome3e-47198BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome1e-43186BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome1e-43186BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-39172BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome1e-36163BLASTN svgBLASTP svg
NC_008463:31688373168837319814929313Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-29139BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-20109BLASTN svgBLASTP svg
NC_010717:23600002360000238719327194Xanthomonas oryzae pv. oryzae PXO99A, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007705:23570002357000237809921100Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_006834:23773352377335240574328409Xanthomonas oryzae pv. oryzae KACC10331, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014228:4360676*4360676438499224317Xenorhabdus nematophila ATCC 19061, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015696:28545628545633044644991Francisella sp. TX077308 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010336:56495856495858753122574Francisella philomiragia subsp. philomiragia ATCC 25017, complete1e-0663.9BLASTN svgBLASTP svg
NC_008702:40644704064470409211327644Azoarcus sp. BH72, complete genome4e-0661.9BLASTN svgBLASTP svg