Pre_GI: BLASTN Hits

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Query: NC_009512:2108686 Pseudomonas putida F1, complete genome

Start: 2108686, End: 2142314, Length: 33629

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome07144BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome02704BLASTN svgBLASTP svg
NC_008027:23316172331617235762526009Pseudomonas entomophila L48, complete genome01386BLASTN svgBLASTP svg
NC_015733:29635482963548298726023713Pseudomonas putida S16 chromosome, complete genome0716BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome3e-167597BLASTN svgBLASTP svg
NC_012660:41494874149487417527325787Pseudomonas fluorescens SBW25 chromosome, complete genome2e-146527BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome1e-86329BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome3e-84321BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome3e-84321BLASTN svgBLASTP svg
NC_006350:13160001316000133759921600Burkholderia pseudomallei K96243 chromosome 1, complete sequence6e-82313BLASTN svgBLASTP svg
NC_010645:406794*40679445127044477Bordetella avium 197N, complete genome8e-63250BLASTN svgBLASTP svg
NC_002947:34923793492379351709924721Pseudomonas putida KT2440, complete genome1e-21113BLASTN svgBLASTP svg
NC_015566:32694693269469329221522747Serratia sp. AS12 chromosome, complete genome7e-20107BLASTN svgBLASTP svg
NC_004578:48696734869673488861018938Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_002947:49314764931476495751626041Pseudomonas putida KT2440, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_008314:47772247772252609948378Ralstonia eutropha H16 chromosome 2, complete sequence7e-1487.7BLASTN svgBLASTP svg
NC_015740:40724154072415409719824784Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-1385.7BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-1385.7BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-1385.7BLASTN svgBLASTP svg
NC_015740:29985002998500301617517676Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-1385.7BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-1385.7BLASTN svgBLASTP svg
NC_010552:24547762454776248709932324Burkholderia ambifaria MC40-6 chromosome 2, complete sequence3e-1385.7BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010801:55027055027059663446365Burkholderia multivorans ATCC 17616 chromosome 3, complete1e-1283.8BLASTN svgBLASTP svg
NC_015968:16188621618862164127522414Enterobacter asburiae LF7a chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010087:31906331906336759948537Burkholderia multivorans ATCC 17616 chromosome 3, complete1e-1283.8BLASTN svgBLASTP svg
NC_020181:2097066*2097066212464227577Enterobacter aerogenes EA1509E, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015566:3659318*3659318367796918652Serratia sp. AS12 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_012779:20645822064582209112726546Edwardsiella ictaluri 93-146, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_003143:16300001630000167609946100Yersinia pestis CO92, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_006155:17560001756000179467638677Yersinia pseudotuberculosis IP 32953, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008149:28023922802392285367651285Yersinia pestis Nepal516, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008150:84472784472789009945373Yersinia pestis Antiqua, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_010634:17555481755548179542439877Yersinia pseudotuberculosis PB1/+, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_015684:2033985*2033985205409920115Oligotropha carboxidovorans OM5 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015424:748785*74878577389925115Aeromonas veronii B565 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013421:30939953093995311483420840Pectobacterium wasabiae WPP163, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011386:2073726*2073726211598742262Oligotropha carboxidovorans OM5, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007705:15833731583373160836624994Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_006834:18494921849492186924719756Xanthomonas oryzae pv. oryzae KACC10331, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007005:58259255825925584413718213Pseudomonas syringae pv. syringae B728a, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011894:6888562*6888562695715868597Methylobacterium nodulans ORS 2060, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010725:4219500*4219500425012730628Methylobacterium populi BJ001, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010172:4064087*4064087410309939013Methylobacterium extorquens PA1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010170:1661915*1661915168523723323Bordetella petrii, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_006834:13950013950015810918610Xanthomonas oryzae pv. oryzae KACC10331, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_006834:16029941602994163009927106Xanthomonas oryzae pv. oryzae KACC10331, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_006834:3422985*3422985344422221238Xanthomonas oryzae pv. oryzae KACC10331, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010717:13430001343000136209919100Xanthomonas oryzae pv. oryzae PXO99A, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010717:14699111469911149033920429Xanthomonas oryzae pv. oryzae PXO99A, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010717:15510001551000159217441175Xanthomonas oryzae pv. oryzae PXO99A, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010995:2547164*2547164256843021267Cellvibrio japonicus Ueda107, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015186:347346*34734637448527140Acidiphilium multivorum AIU301, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007498:16119861611986163200720022Pelobacter carbinolicus DSM 2380, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011770:18118741811874183622424351Pseudomonas aeruginosa LESB58, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013421:15453861545386156866923284Pectobacterium wasabiae WPP163, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012912:2553391*2553391257454821158Dickeya zeae Ech1591, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007947:1556437*1556437158119324757Methylobacillus flagellatus KT, complete genome4e-0661.9BLASTN svgBLASTP svg