Pre_GI Gene

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Host: NC_010717 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010717:1551000 Xanthomonas oryzae pv. oryzae PXO99A, complete genome

Host Lineage: Xanthomonas oryzae; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain is a representative strain of race 6 isolated in the Philippines. This plant pathogen affects rice plants by causing leaf blight, a major problem in Asian countries where rice production occurs on an industrial scale. This organism enters the xylem and spreads throughout the vascular tissue of the plant, which results in wilting of the plant, or to leaf blight if the infection occurs later in development. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. Xanthomonas oryzae contains two pathovars which cause enconomically significant diseases in rice. Xanthomonas oryzae pathovar oryzae causes bacterial leaf blight which is one of the most serious diseases of rice. This disease is common in temperate and tropical areas and can cause significant crop loss.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
155100415526231620tetratricopeptide repeat domain proteinQuickGO ontologyBLASTP
15526351552748114hypothetical proteinBLASTP
155276715575064740RHS Repeat familyQuickGO ontologyBLASTP
15576431557897255hypothetical protein
155803315592711239RHS Repeat familyQuickGO ontologyBLASTP
15612881561581294transposaseQuickGO ontologyBLASTP
15626021562886285transposaseQuickGO ontologyBLASTP
15634911563604114hypothetical proteinBLASTP
156362315679094287RhsD proteinQuickGO ontologyBLASTP
15679611568929969ISXo1 transposaseQuickGO ontologyBLASTP
156998915718301842RhsD proteinQuickGO ontologyBLASTP
15722451572790546transposaseQuickGO ontologyBLASTP
15731551573631477ISXo3 transposase ORF BQuickGO ontologyBLASTP
157363915747691131hypothetical proteinBLASTP
15749651575933969ISXo1 transposaseQuickGO ontologyBLASTP
157626415777181455ISXo2 putative transposaseQuickGO ontologyBLASTP
15777741577902129hypothetical proteinBLASTP
157893715803191383ISXo8 transposaseQuickGO ontologyBLASTP
158038615823531968hypothetical proteinBLASTP
15823711582553183hypothetical proteinBLASTP
158313015859642835hypothetical proteinBLASTP
15859611586890930hypothetical proteinBLASTP
158689915896612763Rhs element Vgr proteinQuickGO ontologyBLASTP
15899551590419465isrso17-ISXo8 transposase proteinQuickGO ontologyBLASTP
15904001590993594ISXo8 transposaseQuickGO ontologyBLASTP
15912061592174969ISXo1 transposaseQuickGO ontologyBLASTP