Query: NC_009092:261778 Shewanella loihica PV-4, complete genome
Start: 261778, End: 284599, Length: 22822
Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015637:819233* | 819233 | 839201 | 19969 | Vibrio anguillarum 775 chromosome chromosome II, complete sequence | 0 | 2048 | BLASTN svg | BLASTP svg |
| NC_014012:3812754* | 3812754 | 3834296 | 21543 | Shewanella violacea DSS12, complete genome | 1e-73 | 285 | BLASTN svg | BLASTP svg |
| NC_009092:2529518 | 2529518 | 2552506 | 22989 | Shewanella loihica PV-4, complete genome | 1e-42 | 182 | BLASTN svg | BLASTP svg |
| NC_009092:3057319* | 3057319 | 3084097 | 26779 | Shewanella loihica PV-4, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
| NC_009092:3783000 | 3783000 | 3802099 | 19100 | Shewanella loihica PV-4, complete genome | 6e-35 | 157 | BLASTN svg | BLASTP svg |
| NC_009092:1047500* | 1047500 | 1072729 | 25230 | Shewanella loihica PV-4, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
| NC_008577:4611431 | 4611431 | 4640873 | 29443 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 4e-33 | 151 | BLASTN svg | BLASTP svg |
| NC_009092:2644164 | 2644164 | 2669291 | 25128 | Shewanella loihica PV-4, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_009092:1305355 | 1305355 | 1328936 | 23582 | Shewanella loihica PV-4, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_015556:515641 | 515641 | 538556 | 22916 | Pseudomonas fulva 12-X chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_009092:3682413 | 3682413 | 3701943 | 19531 | Shewanella loihica PV-4, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_009092:1935281 | 1935281 | 1959285 | 24005 | Shewanella loihica PV-4, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011894:4934304 | 4934304 | 4956099 | 21796 | Methylobacterium nodulans ORS 2060, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |