Pre_GI: BLASTN Hits

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Query: NC_008800:4488112 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Start: 4488112, End: 4511168, Length: 23057

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015224:44261674426167445165025484Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,012580BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,04407BLASTN svgBLASTP svg
NC_008150:4634695*4634695465646621772Yersinia pestis Antiqua, complete genome01966BLASTN svgBLASTP svg
NC_010465:62348*6234810809945752Yersinia pseudotuberculosis YPIII, complete genome01943BLASTN svgBLASTP svg
NC_005810:40453034045303406820222900Yersinia pestis biovar Microtus str. 91001, complete genome2e-158567BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-96361BLASTN svgBLASTP svg
NC_013850:4829455*4829455485950430050Klebsiella variicola At-22 chromosome, complete genome1e-82315BLASTN svgBLASTP svg
NC_014837:33014*330146044127428Pantoea sp. At-9b chromosome, complete genome1e-79305BLASTN svgBLASTP svg
NC_006905:3780000*3780000380296822969Salmonella enterica subsp. enterica serovar Choleraesuis str2e-69272BLASTN svgBLASTP svg
NC_015567:69190*691909503025841Serratia sp. AS9 chromosome, complete genome1e-66262BLASTN svgBLASTP svg
NC_015566:69190*691909503025841Serratia sp. AS12 chromosome, complete genome1e-66262BLASTN svgBLASTP svg
NC_020181:13442591344259136282518567Enterobacter aerogenes EA1509E, complete genome7e-50206BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-33151BLASTN svgBLASTP svg
NC_020064:79422*7942212524145820Serratia marcescens FGI94, complete genome9e-31143BLASTN svgBLASTP svg
NC_009832:110239*11023913543725199Serratia proteamaculans 568, complete genome9e-31143BLASTN svgBLASTP svg
NC_009792:46931524693152471999926848Citrobacter koseri ATCC BAA-895, complete genome1e-29139BLASTN svgBLASTP svg
NC_020260:19933441993344201786024517Cronobacter sakazakii Sp291, complete genome6e-29137BLASTN svgBLASTP svg
NC_010498:4072681*4072681409685324173Escherichia coli SMS-3-5, complete genome6e-29137BLASTN svgBLASTP svg
NC_010468:49074*490746937320300Escherichia coli ATCC 8739, complete genome6e-29137BLASTN svgBLASTP svg
NC_003198:3881221*3881221390454423324Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-29137BLASTN svgBLASTP svg
CP002185:4035502*4035502406409928598Escherichia coli W, complete genome2e-28135BLASTN svgBLASTP svg
CP002516:44744*447447499130248Escherichia coli KO11, complete genome2e-28135BLASTN svgBLASTP svg
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome2e-28135BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-28135BLASTN svgBLASTP svg
NC_011751:4293966*4293966431867224707Escherichia coli UMN026 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome2e-28135BLASTN svgBLASTP svg
NC_004431:4270305*4270305431798947685Escherichia coli CFT073, complete genome9e-28133BLASTN svgBLASTP svg
NC_014500:3744705*3744705376630221598Dickeya dadantii 3937 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_015663:1356982*1356982138951032529Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_009778:19562251956225198255126327Enterobacter sakazakii ATCC BAA-894, complete genome2e-19105BLASTN svgBLASTP svg
NC_014837:1144500*1144500117382529326Pantoea sp. At-9b chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_015968:74124*7412410053226409Enterobacter asburiae LF7a chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_012917:32411963241196329451553320Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013282:20260832026083208019854116Cronobacter turicensis, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009778:29512072951207297908827882Enterobacter sakazakii ATCC BAA-894, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013282:3719500*3719500373815318654Cronobacter turicensis, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009778:259241*25924128824029000Enterobacter sakazakii ATCC BAA-894, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_000964:18733981873398189925825861Bacillus subtilis subsp. subtilis str. 168, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014976:17909179093738319475Bacillus subtilis BSn5 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015663:52532425253242527565022409Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_020244:18758341875834191709041257Bacillus subtilis XF-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013592:27033272703327272585222526Dickeya dadantii Ech586, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014500:443874*44387446959925726Dickeya dadantii 3937 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012917:31980003198000322168023681Pectobacterium carotovorum subsp. carotovorum PC1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013421:15051761505176152341618241Pectobacterium wasabiae WPP163, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_019896:21582232158223218760829386Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_020260:263528*26352829118227655Cronobacter sakazakii Sp291, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009801:3374501*3374501339880324303Escherichia coli E24377A, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012912:4194821*4194821421439319573Dickeya zeae Ech1591, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012880:4117376*4117376413569218317Dickeya dadantii Ech703, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014121:1101093*1101093113435733265Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_004547:1062410*1062410108132518916Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011750:5045927*5045927506827722351Escherichia coli IAI39 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013421:11435001143500116948625987Pectobacterium wasabiae WPP163, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014479:18314041831404185885427451Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_016047:19783121978312200437026059Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_010465:3431500*3431500345664825149Yersinia pseudotuberculosis YPIII, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019897:90518590518592958524401Thermobacillus composti KWC4 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015703:75417275417278042826257Runella slithyformis DSM 19594 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009434:28147428147430109919626Pseudomonas stutzeri A1501, complete genome3e-0661.9BLASTN svgBLASTP svg