Pre_GI: BLASTN Hits

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Query: NC_008463:1188951 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1188951, End: 1207599, Length: 18649

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002516:4321000*4321000434209921100Pseudomonas aeruginosa PAO1, complete genome015410BLASTN svgBLASTP svg
NC_008463:4389721*4389721441663526915Pseudomonas aeruginosa UCBPP-PA14, complete genome02476BLASTN svgBLASTP svg
NC_002516:1236644*1236644126316626523Pseudomonas aeruginosa PAO1, complete genome0648BLASTN svgBLASTP svg
NC_011770:45915004591500460979518296Pseudomonas aeruginosa LESB58, complete genome7e-176624BLASTN svgBLASTP svg
NC_015740:40724154072415409719824784Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-41176BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-39170BLASTN svgBLASTP svg
NC_015740:29985002998500301617517676Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-38167BLASTN svgBLASTP svg
NC_015572:49164304916430495009933670Methylomonas methanica MC09 chromosome, complete genome2e-37165BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-37165BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-37165BLASTN svgBLASTP svg
NC_015942:10475761047576107197424399Acidithiobacillus ferrivorans SS3 chromosome, complete genome8e-34153BLASTN svgBLASTP svg
NC_011901:2202690*2202690223230229613Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-33151BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome3e-30141BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome3e-30141BLASTN svgBLASTP svg
NC_021150:33039593303959332159917641Azotobacter vinelandii CA6, complete genome7e-28133BLASTN svgBLASTP svg
NC_012560:33039613303961332159917639Azotobacter vinelandii DJ, complete genome7e-28133BLASTN svgBLASTP svg
NC_004578:93486793486796406929203Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-27131BLASTN svgBLASTP svg
NC_003277:22257222574180619550Salmonella typhimurium LT2 plasmid pSLT, complete sequence3e-24121BLASTN svgBLASTP svg
NC_004129:92647992647994509918621Pseudomonas fluorescens Pf-5, complete genome4e-23117BLASTN svgBLASTP svg
NC_008314:12756171275617129809922483Ralstonia eutropha H16 chromosome 2, complete sequence2e-22115BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome1e-20109BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,4e-20107BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome4e-20107BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome6e-19103BLASTN svgBLASTP svg
NC_007974:16075001607500162887921380Ralstonia metallidurans CH34 chromosome 2, complete sequence1e-1799.6BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014500:26880952688095271328625192Dickeya dadantii 3937 chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_005773:106000*10600015088044881Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_005773:17688517688520456427680Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_005773:26417152641715266373322019Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_005773:32535753253575328174728173Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_005773:56366065636606566314526540Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_021150:2451500*2451500248001928520Azotobacter vinelandii CA6, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_012560:2451500*2451500248009928600Azotobacter vinelandii DJ, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_007005:98488*9848813693138444Pseudomonas syringae pv. syringae B728a, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014910:15019521501952152412822177Alicycliphilus denitrificans BC chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014541:27366412736641275872122081Ferrimonas balearica DSM 9799 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007274:72979729799468121703Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete1e-0765.9BLASTN svgBLASTP svg
NC_010688:4235528*4235528426665131124Xanthomonas campestris pv. campestris, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010717:4626178*4626178465282826651Xanthomonas oryzae pv. oryzae PXO99A, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014394:2765261*2765261278592820668Gallionella capsiferriformans ES-2 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014973:3151701*3151701317705425354Geobacter sp. M18 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015733:27201832720183276059940417Pseudomonas putida S16 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015733:41300004130000414900419005Pseudomonas putida S16 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_020209:4312892*4312892435777044879Pseudomonas poae RE*1-1-14, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010524:33023983302398332924326846Leptothrix cholodnii SP-6, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009832:426993*42699345559928607Serratia proteamaculans 568, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003295:998000*998000102093922940Ralstonia solanacearum GMI1000, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011894:6793497*6793497681727123775Methylobacterium nodulans ORS 2060, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013446:1724000*1724000175930835309Comamonas testosteroni CNB-2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015671:25580825580830092445117Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_016010:1169850*1169850119450124652Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete9e-0660BLASTN svgBLASTP svg
NC_015968:2583721*2583721261035326633Enterobacter asburiae LF7a chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_009052:71058710589215921102Shewanella baltica OS155, complete genome9e-0660BLASTN svgBLASTP svg
NC_007973:27734272773427279771424288Ralstonia metallidurans CH34 chromosome 1, complete sequence9e-0660BLASTN svgBLASTP svg
NC_004129:17418161741816177185030035Pseudomonas fluorescens Pf-5, complete genome9e-0660BLASTN svgBLASTP svg