Pre_GI: BLASTN Hits

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Query: NC_008278:874015 Frankia alni ACN14a, complete genome

Start: 874015, End: 901229, Length: 27215

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013169:20450002045000206559920600Kytococcus sedentarius DSM 20547, complete genome2e-130474BLASTN svgBLASTP svg
NC_007777:4016000*4016000403859922600Frankia sp. CcI3, complete genome5e-113416BLASTN svgBLASTP svg
NC_003888:43143894314389433545821070Streptomyces coelicolor A3(2), complete genome4e-98367BLASTN svgBLASTP svg
NC_008278:5855401*5855401589499139591Frankia alni ACN14a, complete genome5e-79303BLASTN svgBLASTP svg
NC_007777:461500*46150048580524306Frankia sp. CcI3, complete genome3e-74287BLASTN svgBLASTP svg
NC_011901:491783*49178352043828656Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete9e-56226BLASTN svgBLASTP svg
NC_008278:18450001845000186972124722Frankia alni ACN14a, complete genome2e-53218BLASTN svgBLASTP svg
NC_015593:2103815*2103815214825244438Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete1e-48202BLASTN svgBLASTP svg
NC_011988:924721*92472194733122611Agrobacterium vitis S4 chromosome 2, complete genome5e-42180BLASTN svgBLASTP svg
NC_003295:11277811277813226319486Ralstonia solanacearum GMI1000, complete genome8e-38167BLASTN svgBLASTP svg
NC_009921:5202607*5202607524409941493Frankia sp. EAN1pec, complete genome1e-27133BLASTN svgBLASTP svg
NC_013947:373862*37386240122427363Stackebrandtia nassauensis DSM 44728 chromosome, complete genome6e-26127BLASTN svgBLASTP svg
NC_013174:309943*30994334995340011Jonesia denitrificans DSM 20603, complete genome6e-26127BLASTN svgBLASTP svg
NC_002677:36343236343238893225501Mycobacterium leprae TN, complete genome2e-23119BLASTN svgBLASTP svg
NC_011896:36344836344838894925502Mycobacterium leprae Br4923, complete genome2e-23119BLASTN svgBLASTP svg
NC_013235:508585*50858553729628712Nakamurella multipartita DSM 44233, complete genome4e-21111BLASTN svgBLASTP svg
NC_010572:80226980226982859326325Streptomyces griseus subsp. griseus NBRC 13350, complete genome4e-21111BLASTN svgBLASTP svg
NC_015656:105840*10584012383817999Frankia symbiont of Datisca glomerata chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_004578:56237835623783565173727955Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-20109BLASTN svgBLASTP svg
NC_009956:883548835411789329540Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequence1e-1799.6BLASTN svgBLASTP svg
NC_013131:621366*62136664479723432Catenulispora acidiphila DSM 44928, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014391:6848475*6848475686836219888Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014815:6779538*6779538680255323016Micromonospora sp. L5 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_019673:189487*18948721210322617Saccharothrix espanaensis DSM 44229 complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009921:76607957660795767870217908Frankia sp. EAN1pec, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010120:144000*14400016559921600Neisseria meningitidis 053442, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_014830:335380*33538037339338014Intrasporangium calvum DSM 43043 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_015656:632960*63296066311030151Frankia symbiont of Datisca glomerata chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014168:709036*70903673493125896Segniliparus rotundus DSM 44985 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010424:14657*146574330928653Candidatus Desulforudis audaxviator MP104C, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_013510:170199*17019920517334975Thermomonospora curvata DSM 43183, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002935:181902*18190220033418433Corynebacterium diphtheriae NCTC 13129, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010572:41814034181403420609924697Streptomyces griseus subsp. griseus NBRC 13350, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012793:2122036*2122036214675524720Geobacillus sp. WCH70, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010571:4483500*4483500451059927100Opitutus terrae PB90-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013921:36000*360005820522206Thermoanaerobacter italicus Ab9 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011567:388358*38835841678028423Anoxybacillus flavithermus WK1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011567:204772*20477222623221461Anoxybacillus flavithermus WK1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012522:4299287*4299287434520345917Rhodococcus opacus B4, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013235:46404946404948759923551Nakamurella multipartita DSM 44233, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014391:4617688*4617688463728919602Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010655:2065567*2065567208899123425Akkermansia muciniphila ATCC BAA-835, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008278:132000*13200015230120302Frankia alni ACN14a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014666:80160668016066805302136956Frankia sp. EuI1c chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008699:18163921816392183896922578Nocardioides sp. JS614, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009921:66910896691089673309942011Frankia sp. EAN1pec, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013595:9149273*9149273917160722335Streptosporangium roseum DSM 43021, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014209:81643*8164312009938457Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_014355:399938*39993841891618979Candidatus Nitrospira defluvii, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014391:67105006710500673732426825Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019978:39000*390005838419385Halobacteroides halobius DSM 5150, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007643:3799425*3799425383775538331Rhodospirillum rubrum ATCC 11170, complete genome3e-0661.9BLASTN svgBLASTP svg