Pre_GI: BLASTN Hits

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Query: NC_007951:1711223 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1711223, End: 1737584, Length: 26362

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007952:15875001587500160777020271Burkholderia xenovorans LB400 chromosome 2, complete sequence06690BLASTN svgBLASTP svg
NC_007951:3655088*3655088368859933512Burkholderia xenovorans LB400 chromosome 1, complete sequence06684BLASTN svgBLASTP svg
NC_008750:45023345023347009919867Shewanella sp. W3-18-1, complete genome06347BLASTN svgBLASTP svg
NC_011901:491783*49178352043828656Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete06256BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome05654BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome05654BLASTN svgBLASTP svg
NC_014836:29195082919508294399924492Desulfurispirillum indicum S5 chromosome, complete genome04956BLASTN svgBLASTP svg
NC_007722:21720002172000219518323184Erythrobacter litoralis HTCC2594, complete genome02434BLASTN svgBLASTP svg
NC_014836:16065871606587162498218396Desulfurispirillum indicum S5 chromosome, complete genome01701BLASTN svgBLASTP svg
NC_015740:29985002998500301617517676Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete0999BLASTN svgBLASTP svg
NC_010170:47399254739925476955229628Bordetella petrii, complete genome3e-99371BLASTN svgBLASTP svg
NC_014366:58834758834761001621670Gamma proteobacterium HdN1, complete genome2e-75291BLASTN svgBLASTP svg
NC_014121:34538153453815347704723233Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-53218BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence3e-52214BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome1e-51212BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-41178BLASTN svgBLASTP svg
NC_006511:79254379254382457832036Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-33151BLASTN svgBLASTP svg
NC_004631:79981079981083168931880Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-33151BLASTN svgBLASTP svg
NC_015968:30230483023048304630023253Enterobacter asburiae LF7a chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome2e-25125BLASTN svgBLASTP svg
NC_010688:32298203229820327221942400Xanthomonas campestris pv. campestris, complete genome9e-22113BLASTN svgBLASTP svg
NC_010002:56919685691968571687324906Delftia acidovorans SPH-1, complete genome6e-20107BLASTN svgBLASTP svg
NC_011894:58563758563762859942963Methylobacterium nodulans ORS 2060, complete genome9e-19103BLASTN svgBLASTP svg
NC_008786:25735582573558259844924892Verminephrobacter eiseniae EF01-2, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007492:31804803180480323474054261Pseudomonas fluorescens PfO-1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004431:24449722444972246809923128Escherichia coli CFT073, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_010125:3467379*3467379349031122933Gluconacetobacter diazotrophicus PAl 5, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_008027:23972552397255242125624002Pseudomonas entomophila L48, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015057:241103*24110326799426892Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_011146:63912639128529321382Geobacter bemidjiensis Bem, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015856:30597373059737308304923313Collimonas fungivorans Ter331 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015062:58826588268328124456Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_021066:53421275342127536560823482Raoultella ornithinolytica B6, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011992:12137261213726123279819073Acidovorax ebreus TPSY, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011770:28042182804218282883824621Pseudomonas aeruginosa LESB58, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012660:31799803179980320794927970Pseudomonas fluorescens SBW25 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008750:12533541253354128321029857Shewanella sp. W3-18-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010002:528529*52852955003421506Delftia acidovorans SPH-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015968:21101752110175212892318749Enterobacter asburiae LF7a chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002488:22358832235883226042224540Xylella fastidiosa 9a5c, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012808:28862822886282290930323022Methylobacterium extorquens AM1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007509:719547195411100139048Burkholderia sp. 383 chromosome 3, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007005:3414579*3414579344125226674Pseudomonas syringae pv. syringae B728a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014118:2417838*2417838244051722680Burkholderia sp. CCGE1002 chromosome chromosome 2, complete2e-0765.9BLASTN svgBLASTP svg
NC_015388:1612000*1612000163494022941Desulfobacca acetoxidans DSM 11109 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015856:940625*94062598805147427Collimonas fungivorans Ter331 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007973:18217531821753184776126009Ralstonia metallidurans CH34 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg