Pre_GI: BLASTN Hits

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Query: NC_007912:4125970 Saccharophagus degradans 2-40, complete genome

Start: 4125970, End: 4151084, Length: 25115

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007912:38289803828980385435925380Saccharophagus degradans 2-40, complete genome01239BLASTN svgBLASTP svg
NC_007912:45798734579873460015020278Saccharophagus degradans 2-40, complete genome2e-121444BLASTN svgBLASTP svg
NC_007912:33550033550035963924140Saccharophagus degradans 2-40, complete genome2e-28135BLASTN svgBLASTP svg
NC_007912:39213083921308393909917792Saccharophagus degradans 2-40, complete genome1e-20109BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome3e-18101BLASTN svgBLASTP svg
NC_007912:4396972*4396972442110324132Saccharophagus degradans 2-40, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_011985:3282924*3282924330901226089Agrobacterium radiobacter K84 chromosome 1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008048:2838769*2838769286662127853Sphingopyxis alaskensis RB2256, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004631:1182883*1182883121459931717Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-0971.9BLASTN svgBLASTP svg
NC_004547:2470978*2470978249481623839Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003198:1771432*1771432180593534504Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0971.9BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011420:2692857*2692857271509922243Rhodospirillum centenum SW, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009434:3413461*3413461343258419124Pseudomonas stutzeri A1501, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003047:2798367*2798367282259924233Sinorhizobium meliloti 1021, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020064:2697116*2697116272016423049Serratia marcescens FGI94, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015976:3924962*3924962394896824007Sphingobium sp. SYK-6, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012587:2744731*2744731277030625576Rhizobium sp. NGR234, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008380:4532969*4532969455742124453Rhizobium leguminosarum bv. viciae 3841, complete genome3e-0661.9BLASTN svgBLASTP svg