Query: NC_007912:4125970 Saccharophagus degradans 2-40, complete genome
Start: 4125970, End: 4151084, Length: 25115
Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_007912:3828980 | 3828980 | 3854359 | 25380 | Saccharophagus degradans 2-40, complete genome | 0 | 1239 | BLASTN svg | BLASTP svg |
NC_007912:4579873 | 4579873 | 4600150 | 20278 | Saccharophagus degradans 2-40, complete genome | 2e-121 | 444 | BLASTN svg | BLASTP svg |
NC_007912:335500 | 335500 | 359639 | 24140 | Saccharophagus degradans 2-40, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
NC_007912:3921308 | 3921308 | 3939099 | 17792 | Saccharophagus degradans 2-40, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_010995:764567* | 764567 | 789911 | 25345 | Cellvibrio japonicus Ueda107, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_007912:4396972* | 4396972 | 4421103 | 24132 | Saccharophagus degradans 2-40, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_011985:3282924* | 3282924 | 3309012 | 26089 | Agrobacterium radiobacter K84 chromosome 1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_010170:4800000* | 4800000 | 4908823 | 108824 | Bordetella petrii, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_008048:2838769* | 2838769 | 2866621 | 27853 | Sphingopyxis alaskensis RB2256, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_004631:1182883* | 1182883 | 1214599 | 31717 | Salmonella enterica subsp. enterica serovar Typhi Ty2, complete | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_004547:2470978* | 2470978 | 2494816 | 23839 | Erwinia carotovora subsp. atroseptica SCRI1043, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_003198:1771432* | 1771432 | 1805935 | 34504 | Salmonella enterica subsp. enterica serovar Typhi str. CT18, | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015410:1202370* | 1202370 | 1228248 | 25879 | Pseudomonas mendocina NK-01 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015458:2614108* | 2614108 | 2643887 | 29780 | Pusillimonas sp. T7-7 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_011420:2692857* | 2692857 | 2715099 | 22243 | Rhodospirillum centenum SW, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009439:1174432* | 1174432 | 1199736 | 25305 | Pseudomonas mendocina ymp, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009434:3413461* | 3413461 | 3432584 | 19124 | Pseudomonas stutzeri A1501, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_003047:2798367* | 2798367 | 2822599 | 24233 | Sinorhizobium meliloti 1021, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008027:896000* | 896000 | 919649 | 23650 | Pseudomonas entomophila L48, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_020064:2697116* | 2697116 | 2720164 | 23049 | Serratia marcescens FGI94, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015733:864959* | 864959 | 899316 | 34358 | Pseudomonas putida S16 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015976:3924962* | 3924962 | 3948968 | 24007 | Sphingobium sp. SYK-6, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012587:2744731* | 2744731 | 2770306 | 25576 | Rhizobium sp. NGR234, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008380:4532969* | 4532969 | 4557421 | 24453 | Rhizobium leguminosarum bv. viciae 3841, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |