Query: NC_007492:857428 Pseudomonas fluorescens PfO-1, complete genome
Start: 857428, End: 887335, Length: 29908
Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_004129:926479 | 926479 | 945099 | 18621 | Pseudomonas fluorescens Pf-5, complete genome | 0 | 4823 | BLASTN svg | BLASTP svg |
NC_012660:5793200 | 5793200 | 5832609 | 39410 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 0 | 1943 | BLASTN svg | BLASTP svg |
NC_020209:3874844 | 3874844 | 3904372 | 29529 | Pseudomonas poae RE*1-1-14, complete genome | 0 | 1576 | BLASTN svg | BLASTP svg |
NC_002947:5386489 | 5386489 | 5414167 | 27679 | Pseudomonas putida KT2440, complete genome | 0 | 959 | BLASTN svg | BLASTP svg |
NC_009434:3611738* | 3611738 | 3748875 | 137138 | Pseudomonas stutzeri A1501, complete genome | 0 | 854 | BLASTN svg | BLASTP svg |
NC_008027:775896 | 775896 | 802599 | 26704 | Pseudomonas entomophila L48, complete genome | 0 | 848 | BLASTN svg | BLASTP svg |
NC_010501:734363 | 734363 | 769099 | 34737 | Pseudomonas putida W619, complete genome | 0 | 761 | BLASTN svg | BLASTP svg |
NC_015379:908904 | 908904 | 971106 | 62203 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 4e-163 | 583 | BLASTN svg | BLASTP svg |
NC_012560:4350465 | 4350465 | 4373779 | 23315 | Azotobacter vinelandii DJ, complete genome | 1e-147 | 531 | BLASTN svg | BLASTP svg |
NC_021150:4350461 | 4350461 | 4373775 | 23315 | Azotobacter vinelandii CA6, complete genome | 1e-147 | 531 | BLASTN svg | BLASTP svg |
NC_005773:4797242 | 4797242 | 4817099 | 19858 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 5e-144 | 519 | BLASTN svg | BLASTP svg |
NC_007005:4992730 | 4992730 | 5021328 | 28599 | Pseudomonas syringae pv. syringae B728a, complete genome | 2e-115 | 424 | BLASTN svg | BLASTP svg |
NC_018691:2863659 | 2863659 | 2890376 | 26718 | Alcanivorax dieselolei B5 chromosome, complete genome | 4e-92 | 347 | BLASTN svg | BLASTP svg |
NC_004741:3041294* | 3041294 | 3104689 | 63396 | Shigella flexneri 2a str. 2457T, complete genome | 2e-50 | 208 | BLASTN svg | BLASTP svg |
NC_004337:3049118* | 3049118 | 3116099 | 66982 | Shigella flexneri 2a str. 301, complete genome | 2e-50 | 208 | BLASTN svg | BLASTP svg |
NC_004431:3513147 | 3513147 | 3542680 | 29534 | Escherichia coli CFT073, complete genome | 1e-45 | 192 | BLASTN svg | BLASTP svg |
AP010958:3669500 | 3669500 | 3728274 | 58775 | Escherichia coli O103:H2 str. 12009 DNA, complete genome | 1e-45 | 192 | BLASTN svg | BLASTP svg |
NC_015410:1324313* | 1324313 | 1350875 | 26563 | Pseudomonas mendocina NK-01 chromosome, complete genome | 1e-24 | 123 | BLASTN svg | BLASTP svg |
NC_011770:4924127 | 4924127 | 4972099 | 47973 | Pseudomonas aeruginosa LESB58, complete genome | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_008463:4743296 | 4743296 | 4769099 | 25804 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_002516:891000 | 891000 | 913571 | 22572 | Pseudomonas aeruginosa PAO1, complete genome | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_004337:3590323* | 3590323 | 3952993 | 362671 | Shigella flexneri 2a str. 301, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_005773:3253575 | 3253575 | 3281747 | 28173 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_014752:1363562 | 1363562 | 1386021 | 22460 | Neisseria lactamica ST-640, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_007912:3466966* | 3466966 | 3484627 | 17662 | Saccharophagus degradans 2-40, complete genome | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_008767:1363288 | 1363288 | 1386391 | 23104 | Neisseria meningitidis FAM18, complete genome | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013440:625867 | 625867 | 651226 | 25360 | Haliangium ochraceum DSM 14365, complete genome | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010501:5442000 | 5442000 | 5465408 | 23409 | Pseudomonas putida W619, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015224:3587500 | 3587500 | 3617679 | 30180 | Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome, | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009446:174951 | 174951 | 220269 | 45319 | Dichelobacter nodosus VCS1703A, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_004547:913553 | 913553 | 953342 | 39790 | Erwinia carotovora subsp. atroseptica SCRI1043, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007492:3462929* | 3462929 | 3509406 | 46478 | Pseudomonas fluorescens PfO-1, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_005125:2366778* | 2366778 | 2390591 | 23814 | Gloeobacter violaceus PCC 7421, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_020209:5077410* | 5077410 | 5116159 | 38750 | Pseudomonas poae RE*1-1-14, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |