Query: NC_007492:5214709 Pseudomonas fluorescens PfO-1, complete genome
Start: 5214709, End: 5241684, Length: 26976
Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015379:1151143* | 1151143 | 1182795 | 31653 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 0 | 6958 | BLASTN svg | BLASTP svg |
| NC_012660:5571500* | 5571500 | 5599599 | 28100 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 0 | 5925 | BLASTN svg | BLASTP svg |
| NC_004129:5723787* | 5723787 | 5758179 | 34393 | Pseudomonas fluorescens Pf-5, complete genome | 0 | 2849 | BLASTN svg | BLASTP svg |
| NC_010501:4787963* | 4787963 | 4807286 | 19324 | Pseudomonas putida W619, complete genome | 0 | 1913 | BLASTN svg | BLASTP svg |
| NC_004129:5781413 | 5781413 | 5804975 | 23563 | Pseudomonas fluorescens Pf-5, complete genome | 2e-63 | 252 | BLASTN svg | BLASTP svg |
| NC_015733:1943385* | 1943385 | 1961599 | 18215 | Pseudomonas putida S16 chromosome, complete genome | 2e-56 | 228 | BLASTN svg | BLASTP svg |
| NC_010501:1868888 | 1868888 | 1905275 | 36388 | Pseudomonas putida W619, complete genome | 2e-47 | 198 | BLASTN svg | BLASTP svg |
| NC_007005:2686551* | 2686551 | 2740627 | 54077 | Pseudomonas syringae pv. syringae B728a, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
| NC_008027:3953951* | 3953951 | 3978510 | 24560 | Pseudomonas entomophila L48, complete genome | 2e-44 | 188 | BLASTN svg | BLASTP svg |
| NC_013889:1382705* | 1382705 | 1409939 | 27235 | Thioalkalivibrio sp. K90mix chromosome, complete genome | 7e-32 | 147 | BLASTN svg | BLASTP svg |
| NC_008789:1837493* | 1837493 | 1856164 | 18672 | Halorhodospira halophila SL1, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_007333:430000* | 430000 | 454495 | 24496 | Thermobifida fusca YX, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_013501:1691532* | 1691532 | 1715187 | 23656 | Rhodothermus marinus DSM 4252, complete genome | 9e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_007508:3034718* | 3034718 | 3056155 | 21438 | Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_010334:722408 | 722408 | 742651 | 20244 | Shewanella halifaxensis HAW-EB4, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_010002:4073724 | 4073724 | 4095099 | 21376 | Delftia acidovorans SPH-1, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_015563:4911188* | 4911188 | 4933574 | 22387 | Delftia sp. Cs1-4 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_010002:2518599* | 2518599 | 2542750 | 24152 | Delftia acidovorans SPH-1, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_008686:1383891 | 1383891 | 1430767 | 46877 | Paracoccus denitrificans PD1222 chromosome 1, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_004578:1153738 | 1153738 | 1172688 | 18951 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010571:4483500* | 4483500 | 4510599 | 27100 | Opitutus terrae PB90-1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015740:3678342 | 3678342 | 3716599 | 38258 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_013222:299683* | 299683 | 380365 | 80683 | Robiginitalea biformata HTCC2501, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_011059:1 | 1 | 20579 | 20579 | Prosthecochloris aestuarii DSM 271, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010334:835500 | 835500 | 855193 | 19694 | Shewanella halifaxensis HAW-EB4, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_007517:2632233* | 2632233 | 2653382 | 21150 | Geobacter metallireducens GS-15, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_006677:215466* | 215466 | 257307 | 41842 | Gluconobacter oxydans 621H, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |