Pre_GI Gene

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Host: NC_010334 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010334:722408 Shewanella halifaxensis HAW-EB4, complete genome

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
722408722584177hypothetical proteinBLASTP
722773723177405hypothetical proteinBLASTP
7234657247841320outer membrane efflux family protein putativeQuickGO ontologyBLASTP
7247957262071413efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
7262207294443225heavy metal efflux pump CzcA familyQuickGO ontologyBLASTP
729845730741897peptidase U6 penicillin-insensitive murein endopeptidaseQuickGO ontologyBLASTP
730938731399462hypothetical proteinBLASTP
7316677327281062hypothetical proteinBLASTP
732891733484594ATP-dependent protease La LON domain protein putativeQuickGO ontologyBLASTP
733543734481939pseudouridine synthaseQuickGO ontologyBLASTP
7347187366041887hypothetical proteinBLASTP
736706737641936dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
7376947389981305histidine kinaseQuickGO ontologyBLASTP
738991739545555two component transcriptional regulator Fis familyQuickGO ontologyBLASTP
7397077408551149sulphate transporterQuickGO ontologyBLASTP
7412547426511398cytochrome c putativeQuickGO ontologyBLASTP