Pre_GI: BLASTP Hits

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Query: NC_010334:722408:724795 Shewanella halifaxensis HAW-EB4, complete genome

Start: 724795, End: 726207, Length: 1413

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010506:774455:7778917778917791921302Shewanella woodyi ATCC 51908, complete genomeefflux transporter, RND family, MFP subunit2e-146519
NC_013166:1341575:1359929135992913612391311Kangiella koreensis DSM 16069, complete genomeefflux transporter, RND family, MFP subunit7e-50198
NC_017506:93494:1215631215631228101248Marinobacter adhaerens HP15 chromosome, complete genomeRND family efflux transporter MFP subunit2e-43177
NC_012982:711122:7604227604227617291308Hirschia baltica ATCC 49814, complete genomeefflux transporter, RND family, MFP subunit2e-1584
NC_016616:1091606:1106100110610011076861587Dechlorosoma suillum PS chromosome, complete genomeRND family efflux transporter, MFP subunit3e-1584
NC_008782:2857899:2870183287018328717991617Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit3e-1583.6
NC_016616:2768053:2788227278822727898161590Dechlorosoma suillum PS chromosome, complete genomeRND family efflux transporter, MFP subunit6e-1582.4
NC_011992:2279752:2323781232378123253941614Acidovorax ebreus TPSY, complete genomeefflux transporter, RND family, MFP subunit3e-1480.1
NC_014394:738365:7547057547057562881584Gallionella capsiferriformans ES-2 chromosome, complete genomeefflux transporter, RND family, MFP subunit4e-1376.6
NC_008782:1510000:1536187153618715378001614Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit2e-1274.3
NC_015422:2858228:2872027287202728736401614Alicycliphilus denitrificans K601 chromosome, complete genomeRND family efflux transporter MFP subunit3e-1273.9
NC_009439:1297851:1324725132472513259901266Pseudomonas mendocina ymp, complete genomeRND family efflux transporter MFP subunit6e-1272.8
NC_016024:275845:2758452758452772601416Candidatus Chloracidobacterium thermophilum B chromosome chromosomeRND family efflux transporter MFP subunit8e-1272
NC_015733:5909821:5943165594316559444451281Pseudomonas putida S16 chromosome, complete genomeRND family efflux transporter, MFP subunit1e-1171.2
NC_020126:2299150:2302324230232423036011278Myxococcus stipitatus DSM 14675, complete genomeRND family heavy metal efflux transporter MFP subunit8e-1168.9
NC_009441:3597020:3640520364052036417341215Flavobacterium johnsoniae UW101 chromosome, complete genomeRND family efflux transporter MFP subunit9e-1168.6
NC_008347:2515921:2549944254994425513231380Maricaulis maris MCS10, complete genomeefflux transporter, RND family, MFP subunit1e-1068.2
NC_015726:2177783:2176242217624221777861545Cupriavidus necator N-1 chromosome 1, complete sequencecobalt-zinc-cadmium resistance membrane-fusion protein CzcA5e-1066.2
NC_009434:3611738:3698472369847236997791308Pseudomonas stutzeri A1501, complete genomeCzcB family cobalt/zinc/cadmium efflux transporter membrane fusion protein6e-1065.9
NC_018697:1343756:1357546135754613590901545Cycloclasticus sp. P1 chromosome, complete genomeEfflux transporter, RND family, MFP subunit6e-1065.9
NC_007484:1694738:1705899170589917077761878Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD8e-1065.5
NC_015740:1291739:1304881130488113061881308Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeCzcB family cobalt/zinc/cadmium efflux transporter membrane fusion protein9e-1065.5
NC_010501:30000:6609166091673411251Pseudomonas putida W619, complete genomeefflux transporter, RND family, MFP subunit1e-0965.1
NC_002947:8394:4939949399506491251Pseudomonas putida KT2440, complete genomecobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family1e-0965.1
NC_009512:27783:6137561375626251251Pseudomonas putida F1, complete genomeefflux transporter, RND family, MFP subunit1e-0965.1
NC_010322:29983:6215762157634071251Pseudomonas putida GB-1 chromosome, complete genomeRND family efflux transporter MFP subunit2e-0964.7
NC_011146:2200142:2241568224156822428541287Geobacter bemidjiensis Bem, complete genomeefflux transporter, RND family, MFP subunit2e-0963.9
NC_017986:2548720:2595574259557425968241251Pseudomonas putida ND6 chromosome, complete genomeRND family efflux transporter MFP subunit3e-0963.5
NC_010170:4800000:4866928486692848680911164Bordetella petrii, complete genomeCobalt-zinc-cadmium resistance protein czcB6e-0962.8
NC_007484:1671835:1693338169333816947411404Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD2e-0860.8
NC_007484:1694738:1693338169333816947411404Nitrosococcus oceani ATCC 19707, complete genomeSecretion protein HlyD2e-0860.8
NC_007677:3469661:3490298349029834914071110Salinibacter ruber DSM 13855, complete genomecation efflux system protein CzcB-like protein2e-0860.8
NC_008607:11663:2314423144245621419Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceefflux transporter, RND family, MFP subunit2e-0860.8
NC_012968:1594954:1631356163135616329781623Methylotenera mobilis JLW8, complete genomeefflux transporter, RND family, MFP subunit3e-0860.5
NC_013960:1693643:1702867170286717043931527Nitrosococcus halophilus Nc4 chromosome, complete genomeefflux transporter, RND family, MFP subunit3e-0860.5
NC_009485:1604942:1625585162558516268321248Bradyrhizobium sp. BTAi1 chromosome, complete genomeHlyD family heavy metal efflux pump3e-0860.1
NC_014315:1744485:1751756175175617536331878Nitrosococcus watsoni C-113 chromosome, complete genomeRND family efflux transporter MFP subunit3e-0860.1
NC_008255:1701195:1730348173034817315621215Cytophaga hutchinsonii ATCC 33406, complete genomepossible component of copper transport system5e-0859.7
NC_017506:93494:1126691126691138531185Marinobacter adhaerens HP15 chromosome, complete genomecation efflux family protein5e-0859.7
NC_002939:2337402:2353324235332423545801257Geobacter sulfurreducens PCA, complete genomeheavy metal efflux pump, CzcB family6e-0859.3
NC_002939:2315402:2353324235332423545801257Geobacter sulfurreducens PCA, complete genomeheavy metal efflux pump, CzcB family6e-0859.3
NC_010170:4800000:4833327483332748348321506Bordetella petrii, complete genomePutative membrane fusion protein silB precursor7e-0858.9
NC_020126:6264651:6266131626613162675341404Myxococcus stipitatus DSM 14675, complete genomecation efflux system protein CusB1e-0758.5
NC_014323:5051041:5069403506940350705931191Herbaspirillum seropedicae SmR1 chromosome, complete genomecobalt-zinc-cadmium resistance cation efflux system transmembrane protein1e-0758.2
NC_007645:3870466:3893656389365638947501095Hahella chejuensis KCTC 2396, complete genomeMembrane-fusion protein2e-0757.4
NC_009832:3703202:3723823372382337252741452Serratia proteamaculans 568, complete genomeefflux transporter, RND family, MFP subunit2e-0757.4
NC_009439:2427120:2444240244424024457001461Pseudomonas mendocina ymp, complete genomeRND family efflux transporter MFP subunit3e-0757
NC_014315:1744485:1768637176863717700671431Nitrosococcus watsoni C-113 chromosome, complete genomeRND family efflux transporter MFP subunit5e-0756.2
NC_018080:3088866:3115260311526031167201461Pseudomonas aeruginosa DK2 chromosome, complete genomeRND family efflux transporter MFP subunit8e-0755.5
NC_004663:2509433:2557389255738925586601272Bacteroides thetaiotaomicron VPI-5482, complete genomecation efflux system protein8e-0755.5
NC_010002:1879220:1907453190745319088231371Delftia acidovorans SPH-1, complete genomeefflux transporter, RND family, MFP subunit1e-0655.1
NC_009633:365325:3984453984453996051161Alkaliphilus metalliredigens QYMF chromosome, complete genomeRND family efflux transporter MFP subunit1e-0655.1
NC_011386:3723019:3737938373793837394551518Oligotropha carboxidovorans OM5, complete genomesecretion protein HlyD1e-0654.7
NC_014836:33278:3448834488359661479Desulfurispirillum indicum S5 chromosome, complete genomeRND family efflux transporter MFP subunit2e-0654.3
NC_006677:1052031:1070308107030810714441137Gluconobacter oxydans 621H, complete genomeCation efflux system protein CzcB3e-0653.9
NC_011992:3752867:3771307377130737724371131Acidovorax ebreus TPSY, complete genomeefflux transporter, RND family, MFP subunit2e-0653.9
NC_016602:173314:1897321897321912041473Vibrio furnissii NCTC 11218 chromosome 1, complete sequencecopper/silver resistance periplasmic protein4e-0653.5
NC_011206:2040000:2064137206413720655851449Acidithiobacillus ferrooxidans ATCC 53993, complete genomeefflux transporter, RND family, MFP subunit4e-0653.1
NC_007520:1940120:1943293194329319445761284Thiomicrospira crunogena XCL-2, complete genomeSecretion protein HlyD6e-0652.8
NC_012225:2333500:2339851233985123411101260Brachyspira hyodysenteriae WA1, complete genomemembrane fusion protein6e-0652.8
NC_010002:2933909:2955756295575629569071152Delftia acidovorans SPH-1, complete genomeefflux transporter, RND family, MFP subunit1e-0552