Query: NC_007492:2771021 Pseudomonas fluorescens PfO-1, complete genome
Start: 2771021, End: 2802048, Length: 31028
Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009439:3535152 | 3535152 | 3555614 | 20463 | Pseudomonas mendocina ymp, complete genome | 1e-160 | 575 | BLASTN svg | BLASTP svg |
NC_021150:1965264 | 1965264 | 1988875 | 23612 | Azotobacter vinelandii CA6, complete genome | 8e-146 | 525 | BLASTN svg | BLASTP svg |
NC_012560:1965251 | 1965251 | 1988862 | 23612 | Azotobacter vinelandii DJ, complete genome | 8e-146 | 525 | BLASTN svg | BLASTP svg |
NC_010501:4787963* | 4787963 | 4807286 | 19324 | Pseudomonas putida W619, complete genome | 7e-131 | 476 | BLASTN svg | BLASTP svg |
NC_007492:3655545 | 3655545 | 3686137 | 30593 | Pseudomonas fluorescens PfO-1, complete genome | 2e-48 | 202 | BLASTN svg | BLASTP svg |
NC_007492:2629350 | 2629350 | 2652665 | 23316 | Pseudomonas fluorescens PfO-1, complete genome | 9e-44 | 186 | BLASTN svg | BLASTP svg |
NC_010682:3745000 | 3745000 | 3765099 | 20100 | Ralstonia pickettii 12J chromosome 1, complete sequence | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_007492:2035761 | 2035761 | 2059553 | 23793 | Pseudomonas fluorescens PfO-1, complete genome | 7e-26 | 127 | BLASTN svg | BLASTP svg |
NC_007492:1735595 | 1735595 | 1757535 | 21941 | Pseudomonas fluorescens PfO-1, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
NC_002977:652481 | 652481 | 674599 | 22119 | Methylococcus capsulatus str. Bath, complete genome | 7e-20 | 107 | BLASTN svg | BLASTP svg |
NC_007492:4310828 | 4310828 | 4337167 | 26340 | Pseudomonas fluorescens PfO-1, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
NC_011071:1877500 | 1877500 | 1902614 | 25115 | Stenotrophomonas maltophilia R551-3, complete genome | 7e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_008391:2045348* | 2045348 | 2073768 | 28421 | Burkholderia cepacia AMMD chromosome 2, complete sequence | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_010552:58294* | 58294 | 102573 | 44280 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_010943:2091199 | 2091199 | 2115100 | 23902 | Stenotrophomonas maltophilia K279a, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_014562:1402863 | 1402863 | 1421996 | 19134 | Pantoea vagans C9-1 chromosome, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_007492:3954345 | 3954345 | 3998099 | 43755 | Pseudomonas fluorescens PfO-1, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015947:1877887 | 1877887 | 1900232 | 22346 | Burkholderia sp. JV3 chromosome, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015379:6023926 | 6023926 | 6047280 | 23355 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014659:2737843 | 2737843 | 2760169 | 22327 | Rhodococcus equi 103S, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_015379:1151143* | 1151143 | 1182795 | 31653 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015379:6714545 | 6714545 | 6742160 | 27616 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014923:1249267* | 1249267 | 1272911 | 23645 | Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014121:1101093* | 1101093 | 1134357 | 33265 | Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010002:5691968 | 5691968 | 5716873 | 24906 | Delftia acidovorans SPH-1, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007510:1959883 | 1959883 | 2018034 | 58152 | Burkholderia sp. 383 chromosome 1, complete sequence | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |