Pre_GI: BLASTN Hits

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Query: NC_007492:2771021 Pseudomonas fluorescens PfO-1, complete genome

Start: 2771021, End: 2802048, Length: 31028

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:35351523535152355561420463Pseudomonas mendocina ymp, complete genome1e-160575BLASTN svgBLASTP svg
NC_021150:19652641965264198887523612Azotobacter vinelandii CA6, complete genome8e-146525BLASTN svgBLASTP svg
NC_012560:19652511965251198886223612Azotobacter vinelandii DJ, complete genome8e-146525BLASTN svgBLASTP svg
NC_010501:4787963*4787963480728619324Pseudomonas putida W619, complete genome7e-131476BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome2e-48202BLASTN svgBLASTP svg
NC_007492:26293502629350265266523316Pseudomonas fluorescens PfO-1, complete genome9e-44186BLASTN svgBLASTP svg
NC_010682:37450003745000376509920100Ralstonia pickettii 12J chromosome 1, complete sequence2e-26129BLASTN svgBLASTP svg
NC_007492:20357612035761205955323793Pseudomonas fluorescens PfO-1, complete genome7e-26127BLASTN svgBLASTP svg
NC_007492:17355951735595175753521941Pseudomonas fluorescens PfO-1, complete genome4e-21111BLASTN svgBLASTP svg
NC_002977:65248165248167459922119Methylococcus capsulatus str. Bath, complete genome7e-20107BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome1e-18103BLASTN svgBLASTP svg
NC_011071:18775001877500190261425115Stenotrophomonas maltophilia R551-3, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_008391:2045348*2045348207376828421Burkholderia cepacia AMMD chromosome 2, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_010552:58294*5829410257344280Burkholderia ambifaria MC40-6 chromosome 2, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_010943:20911992091199211510023902Stenotrophomonas maltophilia K279a, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014562:14028631402863142199619134Pantoea vagans C9-1 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007492:39543453954345399809943755Pseudomonas fluorescens PfO-1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015947:18778871877887190023222346Burkholderia sp. JV3 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-1177.8BLASTN svgBLASTP svg
NC_014659:27378432737843276016922327Rhodococcus equi 103S, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-0867.9BLASTN svgBLASTP svg
NC_015379:67145456714545674216027616Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_014923:1249267*1249267127291123645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_014121:1101093*1101093113435733265Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_010002:56919685691968571687324906Delftia acidovorans SPH-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007510:19598831959883201803458152Burkholderia sp. 383 chromosome 1, complete sequence4e-0661.9BLASTN svgBLASTP svg