Pre_GI: BLASTN Hits

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Query: NC_006361:5146000 Nocardia farcinica IFM 10152, complete genome

Start: 5146000, End: 5173599, Length: 27600

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006361:2225072*2225072225678031709Nocardia farcinica IFM 10152, complete genome1e-76295BLASTN svgBLASTP svg
NC_007777:10188241018824104517626353Frankia sp. CcI3, complete genome1e-73285BLASTN svgBLASTP svg
NC_010397:1099312*1099312112264723336Mycobacterium abscessus chromosome Chromosome, complete sequence2e-56228BLASTN svgBLASTP svg
NC_007777:30009413000941302809927159Frankia sp. CcI3, complete genome9e-47196BLASTN svgBLASTP svg
NC_015312:848403*84840386771719315Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-42182BLASTN svgBLASTP svg
NC_002945:1095337*1095337111759922263Mycobacterium bovis AF2122/97, complete genome2e-38168BLASTN svgBLASTP svg
NC_008769:1125567*1125567114763722071Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome2e-38168BLASTN svgBLASTP svg
NC_012207:1097228*1097228111789920672Mycobacterium bovis BCG str. Tokyo 172, complete genome2e-38168BLASTN svgBLASTP svg
NC_015848:1105892*1105892112732621435Mycobacterium canettii CIPT 140010059, complete genome2e-38168BLASTN svgBLASTP svg
NC_000962:1095078*1095078111574920672Mycobacterium tuberculosis H37Rv, complete genome5e-36161BLASTN svgBLASTP svg
NC_002755:1095105*1095105111578720683Mycobacterium tuberculosis CDC1551, complete genome5e-36161BLASTN svgBLASTP svg
NC_009525:1096386*1096386111845622071Mycobacterium tuberculosis H37Ra, complete genome5e-36161BLASTN svgBLASTP svg
NC_009565:1098847*1098847112029321447Mycobacterium tuberculosis F11, complete genome5e-36161BLASTN svgBLASTP svg
NC_013441:14870581487058151769130634Gordonia bronchialis DSM 43247, complete genome1e-27133BLASTN svgBLASTP svg
NC_008699:833737*83373785664022904Nocardioides sp. JS614, complete genome2e-19105BLASTN svgBLASTP svg
NC_014215:1929000*1929000194714618147Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,4e-18101BLASTN svgBLASTP svg
NC_013174:23421*234216198738567Jonesia denitrificans DSM 20603, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014168:471000*47100049425123252Segniliparus rotundus DSM 44985 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_020302:22193782219378224609926722Corynebacterium halotolerans YIM 70093 = DSM 44683, complete4e-1591.7BLASTN svgBLASTP svg
NC_021064:1789980*1789980181232622347Propionibacterium avidum 44067, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010407:32960*329605163318674Clavibacter michiganensis subsp. sepedonicus chromosome, complete9e-1383.8BLASTN svgBLASTP svg
NC_008268:17486351748635177239623762Rhodococcus sp. RHA1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_008618:10915*109153564524731Bifidobacterium adolescentis ATCC 15703, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013510:1786194*1786194181369827505Thermomonospora curvata DSM 43183, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015635:3860570*3860570389185531286Microlunatus phosphovorus NM-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012803:1094679*1094679111581321135Micrococcus luteus NCTC 2665, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018524:444217*44421747409929883Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014958:843456*84345686943725982Deinococcus maricopensis DSM 21211 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014323:26800852680085272417144087Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014318:2252417*2252417228159929183Amycolatopsis mediterranei U32 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009142:55192085519208554891729710Saccharopolyspora erythraea NRRL 2338, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009142:25655612565561258937023810Saccharopolyspora erythraea NRRL 2338, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009142:2480608*2480608252218941582Saccharopolyspora erythraea NRRL 2338, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013131:10370765*103707651039309922335Catenulispora acidiphila DSM 44928, complete genome3e-0661.9BLASTN svgBLASTP svg