Pre_GI: BLASTN Hits

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Query: NC_005139:1784000 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1784000, End: 1927839, Length: 143840

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004459:2443000*24430002588599145600Vibrio vulnificus CMCP6 chromosome I, complete sequence06833BLASTN svgBLASTP svg
NC_004605:13854441385444145786672423Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete01748BLASTN svgBLASTP svg
NC_004603:18975321897532193607538544Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete01061BLASTN svgBLASTP svg
NC_002506:37062937062943982869200Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete0963BLASTN svgBLASTP svg
NC_013456:1819421*1819421184038720967Vibrio sp. Ex25 chromosome 1, complete genome0829BLASTN svgBLASTP svg
NC_013456:1843000*1843000186410221103Vibrio sp. Ex25 chromosome 1, complete genome2e-159573BLASTN svgBLASTP svg
NC_013456:17430461743046176911826073Vibrio sp. Ex25 chromosome 1, complete genome1e-154557BLASTN svgBLASTP svg
NC_002506:298868*29886831909920232Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete4e-114422BLASTN svgBLASTP svg
NC_014228:4408500*4408500443149923000Xenorhabdus nematophila ATCC 19061, complete genome8e-60242BLASTN svgBLASTP svg
NC_014228:22700002270000231663046631Xenorhabdus nematophila ATCC 19061, complete genome3e-53220BLASTN svgBLASTP svg
NC_014170:57954579548259924646Xenorhabdus nematophila ATCC 19061 plasmid XNC1_p, complete1e-52218BLASTN svgBLASTP svg
NC_011753:20185002018500203623417735Vibrio splendidus LGP32 chromosome 1, complete genome8e-51212BLASTN svgBLASTP svg
NC_002506:32455232455235839733846Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete3e-50210BLASTN svgBLASTP svg
NC_018679:3843870*3843870386704523176Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, complete5e-49206BLASTN svgBLASTP svg
NC_004460:16188921618892163876819877Vibrio vulnificus CMCP6 chromosome II, complete sequence3e-47200BLASTN svgBLASTP svg
NC_014366:3653190*3653190367610422915Gamma proteobacterium HdN1, complete genome4e-46196BLASTN svgBLASTP svg
NC_009092:37323903732390375553223143Shewanella loihica PV-4, complete genome4e-43186BLASTN svgBLASTP svg
NC_009092:3057319*3057319308409726779Shewanella loihica PV-4, complete genome2e-39174BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome4e-37167BLASTN svgBLASTP svg
NC_009052:2683447*2683447270509921653Shewanella baltica OS155, complete genome4e-37167BLASTN svgBLASTP svg
NC_008700:367949*36794939264724699Shewanella amazonensis SB2B, complete genome2e-36165BLASTN svgBLASTP svg
NC_009901:22722062272206230998537780Shewanella pealeana ATCC 700345, complete genome2e-36165BLASTN svgBLASTP svg
NC_009901:42162064216206423672120516Shewanella pealeana ATCC 700345, complete genome2e-36165BLASTN svgBLASTP svg
NC_015424:25107642510764253353522772Aeromonas veronii B565 chromosome, complete genome2e-35161BLASTN svgBLASTP svg
NC_014541:2510819*2510819253430723489Ferrimonas balearica DSM 9799 chromosome, complete genome2e-33155BLASTN svgBLASTP svg
NC_009997:26996442699644272218322540Shewanella baltica OS195, complete genome2e-33155BLASTN svgBLASTP svg
NC_010334:15616911561691159069529005Shewanella halifaxensis HAW-EB4, complete genome9e-32149BLASTN svgBLASTP svg
NC_009997:2967521*2967521298899221472Shewanella baltica OS195, complete genome1e-30145BLASTN svgBLASTP svg
NC_004347:40078474007847403509927253Shewanella oneidensis MR-1, complete genome4e-28137BLASTN svgBLASTP svg
NC_005140:34000034000036232922330Vibrio vulnificus YJ016 chromosome II, complete sequence2e-26131BLASTN svgBLASTP svg
NC_008322:46110004611000462903818039Shewanella sp. MR-7, complete genome3e-25127BLASTN svgBLASTP svg
NC_008322:2077628*2077628211677239145Shewanella sp. MR-7, complete genome1e-24125BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome1e-21115BLASTN svgBLASTP svg
NC_011753:16807381680738170074920012Vibrio splendidus LGP32 chromosome 1, complete genome5e-21113BLASTN svgBLASTP svg
NC_009348:3819271*3819271384615626886Aeromonas salmonicida subsp. salmonicida A449, complete genome5e-21113BLASTN svgBLASTP svg
NC_015497:10589801058980108342024441Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome5e-18103BLASTN svgBLASTP svg
NC_018868:29355802935580295799622417Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-18103BLASTN svgBLASTP svg
NC_018868:3036205*3036205307547539271Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-18103BLASTN svgBLASTP svg
NC_018868:40106154010615403309922485Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-18103BLASTN svgBLASTP svg
NC_018868:26158222615822264376527944Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-18103BLASTN svgBLASTP svg
NC_010334:26152602615260265659941340Shewanella halifaxensis HAW-EB4, complete genome8e-1799.6BLASTN svgBLASTP svg
NC_012880:31252613125261315478529525Dickeya dadantii Ech703, complete genome3e-1697.6BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome3e-1697.6BLASTN svgBLASTP svg
NC_008321:21900002190000221007020071Shewanella sp. MR-4, complete genome2e-1491.7BLASTN svgBLASTP svg
NC_012779:610509*61050963687526367Edwardsiella ictaluri 93-146, complete genome7e-1489.7BLASTN svgBLASTP svg
NC_015731:31367631367634081327138Nitrosomonas sp. Is79A3 chromosome, complete genome7e-1179.8BLASTN svgBLASTP svg
NC_009053:10816511081651111181130161Actinobacillus pleuropneumoniae L20, complete genome1e-0975.8BLASTN svgBLASTP svg
NC_011080:45430004543000457179028791Salmonella enterica subsp. enterica serovar Newport str. SL254,7e-0869.9BLASTN svgBLASTP svg
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence7e-0869.9BLASTN svgBLASTP svg
NC_006371:14113351411335144430732973Photobacterium profundum SS9 chromosome 2, complete sequence7e-0869.9BLASTN svgBLASTP svg
NC_020063:3690308*3690308375363663329Enterobacteriaceae bacterium strain FGI 57, complete genome1e-0665.9BLASTN svgBLASTP svg
NC_004463:1992000*1992000204369751698Bradyrhizobium japonicum USDA 110, complete genome4e-0663.9BLASTN svgBLASTP svg