Pre_GI: BLASTN Hits

Some Help

Query: NC_003902:3544743 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Start: 3544743, End: 3564785, Length: 20043

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010717:35649553564955358709922145Xanthomonas oryzae pv. oryzae PXO99A, complete genome0805BLASTN svgBLASTP svg
NC_011770:4763506*4763506478993126426Pseudomonas aeruginosa LESB58, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003902:35140003514000353798123982Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-1591.7BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013416:820989*82098984592424936Aggregatibacter actinomycetemcomitans D11S-1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010939:2085000*2085000210600621007Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete1e-1489.7BLASTN svgBLASTP svg
NC_009053:2025782*2025782204904723266Actinobacillus pleuropneumoniae L20, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_004556:1132354*1132354115105618703Xylella fastidiosa Temecula1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002488:1775629*1775629180340827780Xylella fastidiosa 9a5c, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012856:737170*73717079740260233Ralstonia pickettii 12D chromosome 1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007508:4476726*4476726449836521640Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003197:815964*81596483952123558Salmonella typhimurium LT2, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009648:838000*83800086209024091Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010102:2287934*2287934231106023127Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,6e-1073.8BLASTN svgBLASTP svg
NC_011080:819103*81910384387224770Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-1073.8BLASTN svgBLASTP svg
NC_011083:862901*86290188778924889Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,6e-1073.8BLASTN svgBLASTP svg
NC_011149:779903*77990380318023278Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-1073.8BLASTN svgBLASTP svg
NC_012912:1200000*1200000122694026941Dickeya zeae Ech1591, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_006905:848000*84800086575317754Salmonella enterica subsp. enterica serovar Choleraesuis str2e-0971.9BLASTN svgBLASTP svg
NC_010694:2565580*2565580259415428575Erwinia tasmaniensis, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012214:2673058*2673058270161428557Erwinia pyrifoliae Ep1/96, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012560:37718613771861379428022420Azotobacter vinelandii DJ, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021150:37718603771860379427922420Azotobacter vinelandii CA6, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009654:4253431*4253431427667923249Marinomonas sp. MWYL1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003919:1203405*1203405123359930195Xanthomonas axonopodis pv. citri str. 306, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006370:768745*76874579247423730Photobacterium profundum SS9 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_011184:2723000*2723000274162818629Vibrio fischeri MJ11 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_011184:2840713*2840713285859917887Vibrio fischeri MJ11 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_011186:515214*51521454656031347Vibrio fischeri MJ11 chromosome II, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_013457:979102*97910299831619215Vibrio sp. Ex25 chromosome 2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015410:2351464*2351464238751136048Pseudomonas mendocina NK-01 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013961:1246454*1246454127639829945Erwinia amylovora, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014931:2929695*2929695295251022816Variovorax paradoxus EPS chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012791:2832001*2832001286519533195Variovorax paradoxus S110 chromosome 1, complete genome2e-0661.9BLASTN svgBLASTP svg