Pre_GI: BLASTN Hits

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Query: NC_002947:2157648 Pseudomonas putida KT2440, complete genome

Start: 2157648, End: 2192388, Length: 34741

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002947:4293252*4293252431746924218Pseudomonas putida KT2440, complete genome9e-140505BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome2e-60242BLASTN svgBLASTP svg
NC_004129:24407442440744246509824355Pseudomonas fluorescens Pf-5, complete genome5e-55224BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome7e-48200BLASTN svgBLASTP svg
NC_010515:11242981124298115292928632Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence3e-41178BLASTN svgBLASTP svg
NC_014910:2779573*2779573280354723975Alicycliphilus denitrificans BC chromosome, complete genome4e-34155BLASTN svgBLASTP svg
NC_002516:14740001474000150946535466Pseudomonas aeruginosa PAO1, complete genome1e-33153BLASTN svgBLASTP svg
NC_010804:996837996837104668249846Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-33153BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome2e-32149BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome9e-29137BLASTN svgBLASTP svg
NC_015138:41034574103457412794224486Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete8e-26127BLASTN svgBLASTP svg
NC_007952:30375903037590305617618587Burkholderia xenovorans LB400 chromosome 2, complete sequence5e-21111BLASTN svgBLASTP svg
NC_009138:1974935*1974935203606461130Herminiimonas arsenicoxydans, complete genome2e-20109BLASTN svgBLASTP svg
NC_010801:50500050500052310518106Burkholderia multivorans ATCC 17616 chromosome 3, complete5e-18101BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete5e-18101BLASTN svgBLASTP svg
NC_008258:35815833581583360816926587Shigella flexneri 5 str. 8401, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_004337:36219853621985364626824284Shigella flexneri 2a str. 301, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007509:366836686033156664Burkholderia sp. 383 chromosome 3, complete sequence3e-1695.6BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_004741:41320564132056415578223727Shigella flexneri 2a str. 2457T, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_007645:2181739*2181739220575424016Hahella chejuensis KCTC 2396, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_011894:57879905787990583359945610Methylobacterium nodulans ORS 2060, complete genome5e-1591.7BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome2e-1489.7BLASTN svgBLASTP svg
AP010958:43134624313462433479021329Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1489.7BLASTN svgBLASTP svg
CP002185:38224703822470385930636837Escherichia coli W, complete genome2e-1489.7BLASTN svgBLASTP svg
CP002516:24676724676726745320687Escherichia coli KO11, complete genome2e-1489.7BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
CU928160:37090813709081373009921019Escherichia coli IAI1 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009801:39569173956917397533818422Escherichia coli E24377A, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010102:45570374557037457661219576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-1489.7BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012791:4736084*4736084478464848565Variovorax paradoxus S110 chromosome 1, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009832:25963442596344262148625143Serratia proteamaculans 568, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009800:3685651*3685651370909923449Escherichia coli HS, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010468:23100023100025334622347Escherichia coli ATCC 8739, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010681:22141622141624493823523Burkholderia phytofirmans PsJN chromosome 1, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_011071:22073852207385223164424260Stenotrophomonas maltophilia R551-3, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_007298:2170181*2170181219259922419Dechloromonas aromatica RCB, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_006155:28938022893802291787224071Yersinia pseudotuberculosis IP 32953, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008025:430487*43048745748426998Deinococcus geothermalis DSM 11300, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008825:28899332889933292316233230Methylibium petroleiphilum PM1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007517:1792000*1792000181272720728Geobacter metallireducens GS-15, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007498:1666242*1666242169184325602Pelobacter carbinolicus DSM 2380, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008577:2818546*2818546284622227677Shewanella sp. ANA-3 chromosome 1, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_010498:38384193838419386683628418Escherichia coli SMS-3-5, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012660:46695004669500468960120102Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009138:46726846726851435347086Herminiimonas arsenicoxydans, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015856:764651*76465179679232142Collimonas fungivorans Ter331 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_011027:136954*13695415855321600Chlorobaculum parvum NCIB 8327, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_013592:27033272703327272585222526Dickeya dadantii Ech586, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_005125:24568892456889248293326045Gloeobacter violaceus PCC 7421, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010172:11997251199725121859918875Methylobacterium extorquens PA1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010338:65005465005467814628093Caulobacter sp. K31, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010939:2085000*2085000210600621007Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete1e-0663.9BLASTN svgBLASTP svg
NC_012912:2800884*2800884281980818925Dickeya zeae Ech1591, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010943:24228382422838245809935262Stenotrophomonas maltophilia K279a, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010725:4035397*4035397410959974203Methylobacterium populi BJ001, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome4e-0661.9BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome4e-0661.9BLASTN svgBLASTP svg