Pre_GI: BLASTP Hits

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Query: NC_020134:845164:850368 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 850368, End: 850937, Length: 570

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009633:587562:587562587562588128567Alkaliphilus metalliredigens QYMF chromosome, complete genomeglycerol-3-phosphate responsive antiterminator3e-58224
NC_015425:2528549:254676525467652547331567Clostridium botulinum BKT015925 chromosome, complete genomeglycerol uptake operon antiterminator regulatory protein1e-47189
NC_008593:2281896:229649022964902297056567Clostridium novyi NT, complete genomeglycerol uptake operon antiterminator regulatory protein2e-47188
NC_010321:562494:567052567052567621570Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeglycerol-3-phosphate responsive antiterminator GlpP3e-41167
NC_014964:557910:562468562468563037570Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeglycerol-3-phosphate responsive antiterminator3e-41167
NC_012759:2757826:277803027780302778605576Escherichia coli BW2952 chromosome, complete genomeputative anti-terminator regulatory protein8e-35146
NC_010473:2963951:298476029847602985335576Escherichia coli str. K-12 substr. DH10B, complete genomepredicted anti-terminator regulatory protein8e-35146
AC_000091:2872000:289285228928522893427576Escherichia coli W3110 DNA, complete genomepredicted anti-terminator regulatory protein8e-35146
NC_009800:2889928:291142829114282912003576Escherichia coli HS, complete genomeglycerol-3-phosphate responsive antiterminator2e-34145
NC_019978:2036779:204922120492212049790570Halobacteroides halobius DSM 5150, complete genomeglycerol-3-phosphate responsive antiterminator (mRNA-binding)1e-31135
NC_010723:1014334:101949410194941020054561Clostridium botulinum E3 str. Alaska E43, complete genomeglycerol-3-phosphate responsive antiterminator4e-31134
NC_004193:2522000:253484925348492535391543Oceanobacillus iheyensis HTE831, complete genometranscriptional antiterminator of glycerol uptake operon1e-30132
NC_017208:1050414:105700810570081057568561Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeglycerol uptake operon antiterminator2e-29128
NC_011772:1011220:101596210159621016522561Bacillus cereus G9842, complete genomeglycerol uptake operon antiterminator regulatory protein2e-29128
NC_011725:1032500:103828110382811038841561Bacillus cereus B4264 chromosome, complete genomeglycerol uptake operon antiterminator regulatory protein7e-29126
NC_004722:1008500:101422710142271014787561Bacillus cereus ATCC 14579, complete genomeGlycerol uptake operon antiterminator regulatory protein7e-29126
NC_017200:1157835:116691811669181167478561Bacillus thuringiensis serovar finitimus YBT-020 chromosome,glycerol uptake operon antiterminator regulatory protein2e-28125
NC_010184:1017000:102245410224541023014561Bacillus weihenstephanensis KBAB4, complete genomeglycerol-3-phosphate responsive antiterminator, GlpP2e-28125
NC_008600:1042477:104838910483891048949561Bacillus thuringiensis str. Al Hakam, complete genomeglycerol uptake operon antiterminator regulatory protein3e-28124
NC_005957:1037205:104247910424791043039561Bacillus thuringiensis serovar konkukian str. 97-27, completeglycerol uptake operon antiterminator regulatory protein3e-28124
NC_003997:1007139:101388510138851014445561Bacillus anthracis str. Ames, complete genomeglycerol uptake operon antiterminator regulatory protein3e-28124
NC_005945:1008000:101377810137781014338561Bacillus anthracis str. Sterne, complete genomeglycerol uptake operon antiterminator regulatory protein3e-28124
NC_006274:1040836:104658710465871047147561Bacillus cereus E33L, complete genomeglycerol uptake operon antiterminator regulatory protein3e-28124
NC_007530:1007140:101388510138851014445561Bacillus anthracis str. 'Ames Ancestor', complete genomeglycerol uptake operon antiterminator regulatory protein3e-28124
NC_011773:1050000:105608810560881056648561Bacillus cereus AH820 chromosome, complete genomeglycerol uptake operon antiterminator regulatory protein3e-28124
NC_011969:1084000:108871410887141089274561Bacillus cereus Q1 chromosome, complete genomeglycerol uptake operon antiterminator regulatory protein3e-28124
NC_012659:1008028:101378510137851014345561Bacillus anthracis str. A0248, complete genomeglycerol uptake operon antiterminator regulatory protein3e-28124
NC_016779:991298:994947994947995507561Bacillus cereus F837/76 chromosome, complete genomeGlycerol uptake operon antiterminator regulatory protein3e-28124
NC_014654:1802007:180743018074301808005576Halanaerobium sp. 'sapolanicus' chromosome, complete genomeglycerol-3-phosphate responsive antiterminator, GlpP2e-25115
NC_011415:308825:308825308825309376552Escherichia coli SE11 chromosome, complete genomeputative glycerol uptake operon antiterminator2e-1891.7
NC_014171:1018338:102424810242481024538291Bacillus thuringiensis BMB171 chromosome, complete genomeglycerol uptake operon antiterminator2e-1478.6
NC_013199:392450:397166397166397729564Lactobacillus rhamnosus Lc 705, complete genomepredicted ORF4e-1167.8