Pre_GI: BLASTP Hits

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Query: NC_020134:2237421:2248726 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2248726, End: 2249631, Length: 906

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009495:2571732:257611625761162576994879Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeribosomal biogenesis GTPase3e-82305
NC_009698:2420484:242048424204842421362879Clostridium botulinum A str. Hall chromosome, complete genomeribosomal biogenesis GTPase5e-82304
NC_010184:3713359:371335937133593714249891Bacillus weihenstephanensis KBAB4, complete genomeGTP-binding protein HSR1-related1e-81303
NC_011969:3575988:358659035865903587480891Bacillus cereus Q1 chromosome, complete genomeribosomal biogenesis gtpase1e-81303
NC_003909:3606177:362998236299823630872891Bacillus cereus ATCC 10987, complete genomeGTPase family protein1e-81303
NC_012581:559182:583086583086583976891Bacillus anthracis str. CDC 684 chromosome, complete genomeribosomal biogenesis GTPase2e-81302
NC_003997:3617000:365458436545843655474891Bacillus anthracis str. Ames, complete genomeGTPase family protein2e-81302
NC_007530:3616828:365471136547113655601891Bacillus anthracis str. 'Ames Ancestor', complete genomegtpase family protein2e-81302
NC_005945:3636321:365527936552793656169891Bacillus anthracis str. Sterne, complete genomeGTPase family protein2e-81302
NC_012659:3617000:365461136546113655501891Bacillus anthracis str. A0248, complete genomeribosomal biogenesis GTPase2e-81302
NC_014335:3589726:360543836054383606328891Bacillus cereus biovar anthracis str. CI chromosome, completeGTP-binding protein HSR1-related protein2e-81302
NC_011658:3603009:364262936426293643519891Bacillus cereus AH187 chromosome, complete genomeribosomal biogenesis GTPase2e-81302
NC_011773:3689473:368947336894733690363891Bacillus cereus AH820 chromosome, complete genomeribosomal biogenesis GTPase2e-81302
NC_005957:3665657:367625736762573677147891Bacillus thuringiensis serovar konkukian str. 97-27, completeconserved hypothetical protein, GTPase family2e-81302
NC_011772:3821917:382502338250233825913891Bacillus cereus G9842, complete genomeGTPase family protein1e-81302
NC_017208:3816753:385469838546983855588891Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeribosomal biogenesis GTPase1e-81302
NC_014171:3726054:373856537385653739455891Bacillus thuringiensis BMB171 chromosome, complete genomeribosomal biogenesis GTPase3e-81301
NC_010520:2635750:263913326391332640011879Clostridium botulinum A3 str. Loch Maree, complete genomeGTP-binding protein5e-81301
NC_014328:1379437:139231213923121393166855Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative GTP-binding protein1e-79296
NC_020291:1437431:145001414500141450880867Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeribosome biogenesis GTPase A2e-79295
NC_009848:1542978:155695915569591557807849Bacillus pumilus SAFR-032, complete genomeribosomal biogenesis GTPase3e-77288
UCMB5137:1159520:117585511758551176700846Bacillus atrophaeus UCMB-5137ribosomal biogenesis GTPase1e-76286
NC_013216:1219775:122229312222931223144852Desulfotomaculum acetoxidans DSM 771, complete genomeGTP-binding protein HSR1-related3e-76285
NC_014483:1973233:198400119840011984900900Paenibacillus polymyxa E681 chromosome, complete genomePredicted GTPase4e-75281
NC_010382:1607013:162432916243291625201873Lysinibacillus sphaericus C3-41, complete genomehypothetical protein9e-74276
NC_018515:3865522:388113738811373881964828Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRas superfamily GTP-binding protein YlqF2e-73276
NC_014654:1529500:153309915330991533956858Halanaerobium sp. 'sapolanicus' chromosome, complete genomeribosome biogenesis GTP-binding protein YlqF2e-73275
NC_016584:4860360:487638748763874877220834Desulfosporosinus orientis DSM 765 chromosome, complete genomeribosome biogenesis GTP-binding protein YlqF6e-70264
NC_014624:2668157:266932426693242670154831Eubacterium limosum KIST612 chromosome, complete genomeribosome biogenesis GTP-binding protein YlqF8e-66250
NC_011744:688000:6901306901306911611032Vibrio splendidus LGP32 chromosome 2, complete genomeputative GTPase5e-65248
NC_012471:1197534:120162112016211202475855Streptococcus equi subsp. equi 4047, complete genomeGTPase protein4e-64244
NC_009784:1231791:124951312495131250457945Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein5e-64244
NC_016826:929259:933722933722934576855Streptococcus infantarius subsp. infantarius CJ18 chromosome,ribosomal biogenesis GTPase1e-61236
NC_010334:2090990:211206821120682113006939Shewanella halifaxensis HAW-EB4, complete genomeGTP-binding protein HSR1-related3e-61235
NC_013199:1407742:142181414218141422671858Lactobacillus rhamnosus Lc 705, complete genomeribosomal biogenesis GTPase9e-58224
NC_005125:4062025:407109640710964071986891Gloeobacter violaceus PCC 7421, complete genomehypothetical protein6e-47187
NC_000853:771746:794605794605795393789Thermotoga maritima MSB8, complete genomehypothetical protein4e-34145
NC_014760:101469:106486106486107346861Mycoplasma bovis PG45 chromosome, complete genomeGTP-binding protein8e-33140
NC_013642:545464:568308568308569096789Thermotoga naphthophila RKU-10, complete genomeribosome biogenesis GTP-binding protein YlqF6e-32137
NC_009376:1:145421454215327786Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeHSR1-like GTP-binding protein1e-24114
NC_016885:2091918:214931221493122150097786Pyrobaculum oguniense TE7 chromosome, complete genomeputative GTPase2e-23109
NC_016070:637739:637739637739638536798Thermoproteus tenax Kra 1, complete genomeGTPase2e-22106
NC_016645:1838405:186941118694111870187777Pyrobaculum sp. 1860 chromosome, complete genomehypothetical protein2e-21103
NC_011025:313897:328866328866329699834Mycoplasma arthritidis 158L3-1, complete genomeGTPase protein YlqF4e-21102
NC_003364:402268:421982421982422758777Pyrobaculum aerophilum str. IM2, complete genomeGTP binding protein, conjectural1e-20100
NC_018876:1061682:106583510658351066608774Methanolobus psychrophilus R15 chromosome, complete genomeGTP-binding protein4e-1892
NC_014471:1153438:118970111897011190516816Ignisphaera aggregans DSM 17230 chromosome, complete genomeGTP-binding protein HSR1-related1e-1584.3
NC_007181:1295956:133573213357321336511780Sulfolobus acidocaldarius DSM 639, complete genomeGTP-binding protein2e-1583.2
NC_012623:1119192:113769611376961138484789Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeGTP-binding protein HSR1-related2e-1479.7
NC_009440:1857589:187739418773941878191798Metallosphaera sedula DSM 5348 chromosome, complete genomeGTP-binding protein YlqF9e-1477.8
NC_003106:1435295:145359114535911454388798Sulfolobus tokodaii str. 7, complete genomehypothetical GTP-binding protein2e-1376.6
NC_002754:491695:510007510007510810804Sulfolobus solfataricus P2, complete genomeGTP binding protein, hypothetical4e-1272.4
NC_013525:1871795:1896507189650718978531347Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomesmall GTP-binding protein7e-1168.2
NC_005213:202400:318940318940319626687Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-1067.4
NC_005213:295994:318940318940319626687Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-1067.4
NC_015125:222231:2576452576452591681524Microbacterium testaceum StLB037, complete genomepredicted GTPase2e-0963.2
NC_007644:1352794:1367103136710313684191317Moorella thermoacetica ATCC 39073, complete genomeSmall GTP-binding protein domain7e-0961.6
NC_014215:1243125:1261998126199812633471350Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,GTP binding protein6e-0858.5
NC_020291:1389114:1404241140424114055571317Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeGTP-binding protein EngA2e-0757
NC_009800:2651730:2673523267352326749951473Escherichia coli HS, complete genomeGTP-binding protein EngA3e-0756.2
NC_011601:2854178:2871313287131328727851473Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeGTP-binding protein EngA4e-0755.8
NC_016048:1930089:1961477196147719628021326Oscillibacter valericigenes Sjm18-20, complete genomeGTPase4e-0755.8
NC_008025:2211813:2211813221181322131381326Deinococcus geothermalis DSM 11300, complete genomeSmall GTP-binding protein domain3e-0755.8
NC_013406:7092510:7110807711080771121831377Paenibacillus sp. Y412MC10 chromosome, complete genometRNA modification GTPase TrmE3e-0755.8
NC_007333:1411050:1411050141105014124411392Thermobifida fusca YX, complete genomeGTP-binding protein EngA5e-0755.5
NC_016627:4871875:4893585489358548949671383Clostridium clariflavum DSM 19732 chromosome, complete genometRNA modification GTPase trmE5e-0755.1
NC_006370:847204:8472048472048486851482Photobacterium profundum SS9 chromosome 1, complete sequenceGTP-binding protein EngA5e-0755.1
NC_018697:618832:6188326188326202381407Cycloclasticus sp. P1 chromosome, complete genomeGTP-binding factor9e-0754.7
NC_014721:2012751:2031601203160120329231323Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeribosome-associated gtpase enga7e-0754.7
NC_008044:3024125:3032719303271930340051287Silicibacter sp. TM1040, complete genometRNA modification GTPase TrmE1e-0654.3
NC_017516:1408000:1425390142539014268471458Neisseria meningitidis H44/76 chromosome, complete genomeGTP-binding protein2e-0653.5
NC_009633:3055413:305883630588363059723888Alkaliphilus metalliredigens QYMF chromosome, complete genomeGTP-binding protein Era2e-0653.1
NC_014098:3372000:3381556338155633829411386Bacillus tusciae DSM 2912 chromosome, complete genometRNA modification GTPase TrmE3e-0653.1
NC_014657:673500:6923876923876937091323Caldicellulosiruptor owensensis OL chromosome, complete genomeribosome-associated gtpase enga8e-0651.2
NC_005070:617448:6424496424496438161368Synechococcus sp. WH 8102, complete genomeGTP-binding protein EngA8e-0651.2
NC_011898:4044500:4064426406442640658081383Clostridium cellulolyticum H10, complete genometRNA modification GTPase TrmE1e-0551.2