Pre_GI: BLASTP Hits

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Query: NC_017986:5797044:5814463 Pseudomonas putida ND6 chromosome, complete genome

Start: 5814463, End: 5814777, Length: 315

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:3220500:324109332410933241329237Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, PbsX family1e-23108
NC_010322:583842:594787594787595062276Pseudomonas putida GB-1 chromosome, complete genomehelix-turn-helix domain-containing protein3e-1994
NC_010501:2609567:262073326207332621008276Pseudomonas putida W619, complete genomehelix-turn-helix domain protein4e-1786.7
NC_017986:2548720:256271225627122563032321Pseudomonas putida ND6 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1683.2
NC_003295:2787371:281222328122232812513291Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN6e-1682.8
NC_020829:2152000:215225621522562152549294Pseudomonas denitrificans ATCC 13867, complete genomehelix-turn-helix domain-containing protein8e-1682.4
NC_011992:1318691:134321513432151343505291Acidovorax ebreus TPSY, complete genomehelix-turn-helix domain protein9e-1682
NC_015381:2859000:289856828985682898861294Burkholderia gladioli BSR3 chromosome 1, complete sequenceXRE family transcriptional regulator3e-1477
NC_008752:725189:744058744058744351294Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, XRE family4e-1477
NC_010170:4800000:481912848191284819427300Bordetella petrii, complete genomepredicted transcriptional regulator1e-1375.5
NC_021150:3667176:367114736711473671383237Azotobacter vinelandii CA6, complete genomeTranscriptional regulator Cro/CI-like protein6e-1372.8
NC_012560:3667177:367114836711483671384237Azotobacter vinelandii DJ, complete genomeTranscriptional regulator Cro/CI-like protein6e-1372.8
NC_008577:1455000:147510214751021475392291Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, XRE family6e-1372.8
NC_009656:3869281:387000838700083870244237Pseudomonas aeruginosa PA7 chromosome, complete genomehelix-turn-helix domain-containing protein7e-1269.3
NC_015410:2698572:272656427265642726854291Pseudomonas mendocina NK-01 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1167.8
NC_020829:4429435:445048844504884450811324Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator2e-1167.4
NC_014540:2828299:284515128451512845447297Burkholderia sp. CCGE1003 chromosome 2, complete sequencehelix-turn-helix domain-containing protein2e-1064.3
NC_004578:5336773:539626453962645396704441Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA-binding protein7e-0959.3
NC_007952:3283394:331374433137443314040297Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, XRE family1e-0858.5
NC_007951:925442:932331932331932627297Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, XRE family1e-0858.5
NC_012791:2386000:239246023924602392813354Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein2e-0857.4
NC_004578:3193490:320831232083123208635324Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA-binding protein3e-0753.9
NC_020209:4312892:433540243354024335872471Pseudomonas poae RE*1-1-14, complete genomeCro/CI family transcriptional regulator1e-0652
NC_010322:4623867:466672646667264667013288Pseudomonas putida GB-1 chromosome, complete genomeXRE family transcriptional regulator3e-0650.4