Pre_GI: BLASTP Hits

Some Help

Query: NC_017986:5509569:5518050 Pseudomonas putida ND6 chromosome, complete genome

Start: 5518050, End: 5519420, Length: 1371

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:3404000:3412988341298834146131626Pseudomonas putida KT2440, complete genomephage recombinase, putative0852
NC_008781:2575213:2579464257946425810861623Polaromonas naphthalenivorans CJ2, complete genomeRecombinase4e-108392
NC_009659:3520093:3543028354302835448781851Janthinobacterium sp. Marseille chromosome, complete genomesite-specific recombinase2e-20100
NC_017047:1796000:1800214180021418019651752Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-1894.4
NC_009778:2227627:2270858227085822726601803Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1893.2
NC_011979:646518:6672356672356690941860Geobacter sp. FRC-32, complete genomeRecombinase8e-1582
NC_014121:2330451:2335767233576723375361770Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-1377.8
NC_002947:1268089:1281215128121512829061692Pseudomonas putida KT2440, complete genomerecombinase-related protein3e-1170.5
NC_007517:3524715:3540161354016135420291869Geobacter metallireducens GS-15, complete genomeResolvase-like:Recombinase9e-1168.6
NC_015633:1702000:1709920170992017117971878Vibrio anguillarum 775 chromosome chromosome I, complete sequenceSite-specific recombinase9e-1168.6
NC_012559:854507:8853478853478863481002Laribacter hongkongensis HLHK9, complete genomeRecombinase1e-0964.7
CU928145:824367:8316568316568331821527Escherichia coli 55989 chromosome, complete genomeputative site-specific invertase; DLP12 prophage2e-0964.3
NC_011748:824367:8316568316568331821527Escherichia coli 55989, complete genomeputative site-specific invertase; DLP12 prophage2e-0964.3
NC_011415:600375:6208596208596223851527Escherichia coli SE11 chromosome, complete genomeputative phage recombinase4e-0963.2
NC_011769:3434744:3450826345082634525981773Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeRecombinase7e-0962.4
NC_013941:699286:7082487082487097741527Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDLP12 prophage; recombinase1e-0861.6
NC_016614:1178000:1189433118943311912291797Vibrio sp. EJY3 chromosome 2, complete sequencesite-specific recombinase1e-0861.6
AC_000091:558920:5681255681255696511527Escherichia coli W3110 DNA, complete genomepredicted recombinase1e-0861.6
NC_000913:558920:5681255681255696511527Escherichia coli K12, complete genomeDLP12 prophage; predicted recombinase1e-0861.6
NC_010473:498252:5074575074575089831527Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted recombinase1e-0861.6
NC_011353:2957962:2968757296875729702831527Escherichia coli O157:H7 str. EC4115 chromosome, complete genomerecombinase family protein1e-0861.6
NC_012759:461680:4708854708854724111527Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative recombinase1e-0861.6
NC_012947:3231893:3243361324336132448871527Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeRecombinase1e-0861.6
NC_012967:531000:5407925407925423181527Escherichia coli B str. REL606 chromosome, complete genomeputative recombinase1e-0861.6
NC_013008:2910567:2923628292362829251541527Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDLP12 prophage recombinase1e-0861.6
NC_016812:4246542:4250124425012442512931170Sinorhizobium fredii HH103, complete genomesite-specific recombinase5e-0859.7
NC_004547:2810151:2825271282527128268811611Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative integrase/recombinase5e-0859.3
NC_007519:2773000:2776921277692127788551935Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein4e-0653.1