Pre_GI: BLASTP Hits

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Query: NC_017270:1755552:1785414 Vibrio cholerae LMA3984-4 chromosome chromosome I, complete

Start: 1785414, End: 1785614, Length: 201

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017270:1755552:177484717748471775263417Vibrio cholerae LMA3984-4 chromosome chromosome I, completeDNA repair protein RadC9e-26115
NC_002505:1931750:193612119361211936597477Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA repair protein RadC, putative1e-25115
NC_009457:1444449:148922414892241489700477Vibrio cholerae O395 chromosome 2, complete sequenceDNA repair protein RadC1e-25115
NC_012578:1838470:188325418832541883730477Vibrio cholerae M66-2 chromosome I, complete sequenceputative DNA repair protein RadC1e-25115
NC_012582:2013515:202064320206432021119477Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative DNA repair protein RadC1e-25115
NC_012668:1688500:171091017109101711386477Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA repair protein RadC1e-25115
NC_016445:1363831:140752214075221407998477Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA repair protein RadC1e-25115
NC_016944:1978058:198242919824291982905477Vibrio cholerae IEC224 chromosome I, complete sequenceDNA repair protein RadC1e-25115
NC_005139:2201820:227281922728192273373555Vibrio vulnificus YJ016 chromosome I, complete sequenceDNA repair protein4e-22103
NC_005139:796546:812421812421812918498Vibrio vulnificus YJ016 chromosome I, complete sequenceDNA repair protein2e-0651.2
NC_012668:62500:803358033580808474Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA repair protein RadC3e-0650.8
NC_002505:514732:539531539531540004474Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA repair protein RadC-related protein3e-0650.8