Pre_GI: BLASTP Hits

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Query: NC_017062:61500:75404 Rickettsia typhi str. B9991CWPP chromosome, complete genome

Start: 75404, End: 76288, Length: 885

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017066:57571:749877498775871885Rickettsia typhi str. TH1527 chromosome, complete genomehypothetical protein2e-150531
NC_006142:57571:749877498775871885Rickettsia typhi str. Wilmington, complete genomehypothetical protein2e-150531
NC_000963:83408:857838578386667885Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein2e-137488
NC_017050:83406:857818578186665885Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein2e-137488
NC_017056:86663:857928579286676885Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomehypothetical protein2e-137488
NC_017057:83415:857908579086674885Rickettsia prowazekii str. RpGvF24 chromosome, complete genomehypothetical protein2e-137488
NC_012633:98000:101101101101101985885Rickettsia africae ESF-5, complete genomeS-adenosylmethionine transporter3e-129461
NC_017058:129474:132593132593133477885Rickettsia australis str. Cutlack chromosome, complete genomeS-adenosylmethionine transporter4e-129460
NC_010263:100000:103275103275104159885Rickettsia rickettsii str. Iowa, complete genometransporter, drug/metabolite exporter family9e-129459
NC_009882:100000:103276103276104160885Rickettsia rickettsii str. 'Sheila Smith', complete genomehypothetical protein9e-129459
NC_016908:100000:103309103309104193885Rickettsia rickettsii str. Colombia chromosome, complete genometransporter, drug/metabolite exporter family protein9e-129459
NC_016909:100000:103304103304104188885Rickettsia rickettsii str. Arizona chromosome, complete genometransporter, drug/metabolite exporter family protein9e-129459
NC_016914:99184:103362103362104246885Rickettsia rickettsii str. Hino chromosome, complete genometransporter, drug/metabolite exporter family protein9e-129459
NC_009881:92929:971789717898062885Rickettsia akari str. Hartford, complete genomeS-adenosylmethionine transporter1e-127456
NC_010793:1811401:181216718121671813039873Orientia tsutsugamushi str. Ikeda, complete genomehypothetical protein5e-65248
NC_009488:186000:186178186178187050873Orientia tsutsugamushi str. Boryong, complete genomepermeases-like integral membrane protein3e-64245
NC_007086:2887875:296390529639052964816912Xanthomonas campestris pv. campestris str. 8004, complete genomeintegral membrane protein8e-21101
NC_010688:2850164:287009128700912871002912Xanthomonas campestris pv. campestris, complete genomeDrug/metabolite transporter superfamily protein,probable8e-21101
NC_016147:2266419:226879922687992269710912Pseudoxanthomonas spadix BD-a59 chromosome, complete genomedrug/metabolite transporter superfamily protein2e-20100
NC_014364:2751662:275726727572672758211945Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF6 transmembrane9e-1890.9
NC_007775:1002934:100433210043321005240909Synechococcus sp. JA-3-3Ab, complete genomehypothetical protein6e-1685.1
NC_002947:4167500:417124041712404172118879Pseudomonas putida KT2440, complete genomehypothetical protein2e-1583.6
NC_015061:2927707:294530329453032946223921Rahnella sp. Y9602 chromosome, complete genomehypothetical protein2e-1583.2
NC_017047:2957957:297555329755532976473921Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein3e-1582.8
NC_009720:2143124:215612621561262157040915Xanthobacter autotrophicus Py2, complete genomehypothetical protein5e-1581.6
NC_015496:1857900:187766818776681878498831Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeprotein of unknown function DUF6 transmembrane1e-1377
NC_008686:405159:410232410232411185954Paracoccus denitrificans PD1222 chromosome 1, complete sequenceprotein of unknown function DUF6, transmembrane3e-1375.9
NC_003910:4234000:426017342601734261126954Colwellia psychrerythraea 34H, complete genomemembrane protein4e-1375.5
NC_016646:275818:279825279825280715891Pseudovibrio sp. FO-BEG1 plasmid unnamed, complete sequenceintegral membrane protein5e-1375.1
NC_008044:136844:162286162286163173888Silicibacter sp. TM1040, complete genomeprotein of unknown function DUF6, transmembrane3e-1272.8
NC_014310:94645:111981111981112877897Ralstonia solanacearum PSI07 megaplasmid, complete sequences-adenosylmethionine uptake transporter2e-1170.1
NC_003296:140889:154403154403155353951Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN3e-1169.3
NC_016585:1004000:100943410094341010330897Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencehypothetical protein3e-1169.3
NC_007493:1672163:170872817087281709615888Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencepossible transporter, DMT superfamily5e-1065.5
NC_015458:3390674:341058934105893411515927Pusillimonas sp. T7-7 chromosome, complete genomeintegral membrane protein2e-0963.2
NC_020911:2998000:304012930401293040896768Octadecabacter antarcticus 307, complete genome1e-0860.8
NC_015425:2528549:256968625696862570534849Clostridium botulinum BKT015925 chromosome, complete genometransporter2e-0860.1
NC_014010:484000:503790503790504782993Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeintegral membrane protein, putative2e-0860.1
NC_010627:233572:254004254004254888885Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceprotein of unknown function DUF6 transmembrane4e-0858.9
NC_004460:973738:978362978362979276915Vibrio vulnificus CMCP6 chromosome II, complete sequencePermease of the drug/metabolite transporter (DMT) superfamily6e-0858.2
NC_014259:2948335:294833529483352949231897Acinetobacter sp. DR1 chromosome, complete genomehypothetical protein7e-0858.2
NC_008705:868623:948197948197949078882Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF6, transmembrane4e-0755.5
NC_008146:861319:942390942390943271882Mycobacterium sp. MCS, complete genomeprotein of unknown function DUF6, transmembrane4e-0755.5
NC_015724:339500:342805342805343470666Cupriavidus necator N-1 plasmid BB2p, complete sequenceS-adenosylmethionine uptake transporter4e-0755.5
NC_016027:229180:253349253349254299951Gluconacetobacter xylinus NBRC 3288, complete genomedrug/metabolite transporter integral membrane protein6e-0755.1
NC_005090:1921154:193809619380961938971876Wolinella succinogenes DSM 1740, complete genomePUTATIVE INTEGRAL MEMBRANE PROTEIN-DRUG METABOLITE TRANSPORTER SUPERFAMILY2e-0653.5
NC_020911:4465500:446768744676874468523837Octadecabacter antarcticus 307, complete genomeputative drug/metabolite superfamily transporter4e-0652.4