Pre_GI: BLASTP Hits

Some Help

Query: NC_016848:12548:13971 Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete

Start: 13971, End: 15785, Length: 1815

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Akorabo, Ghana in 1980. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021508:12543:1396613966157801815Treponema pallidum subsp. pallidum SS14, complete genomephenylalanine--tRNA ligase, beta subunit01241
NC_010741:12542:1396313963157771815Treponema pallidum subsp. pallidum SS14, complete genomephenylalanyl-tRNA synthetase subunit beta01241
NC_000919:12545:1396613966157801815Treponema pallidum subsp. pallidum str. Nichols, complete genomephenylalanyl-tRNA synthetase beta subunit01241
NC_016842:1:1397113971157851815Treponema pallidum subsp. pertenue str. SamoaD chromosome, completephenylalanine--tRNA ligase, beta subunit01241
NC_016843:1:1397113971157851815Treponema pallidum subsp. pertenue str. Gauthier chromosome,phenylalanine--tRNA ligase, beta subunit01241
NC_016844:12545:1396813968157821815Treponema pallidum subsp. pallidum DAL-1 chromosome, completephenylalanine--tRNA ligase, beta subunit01241
NC_017268:1:1392113921157831863Treponema pallidum subsp. pallidum str. Chicago chromosome,phenylalanyl-tRNA synthetase subunit beta01238
NC_015714:1:1401414014158281815Treponema paraluiscuniculi Cuniculi A chromosome, complete genomephenylalanine--tRNA ligase subunit beta01230
NC_015577:3589884:3589884358988435916261743Treponema azotonutricium ZAS-9 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta4e-156551
NC_013741:1304000:1321060132106013227061647Archaeoglobus profundus DSM 5631, complete genomephenylalanyl-tRNA synthetase, beta subunit3e-66253
NC_008698:903759:9037599037599054291671Thermofilum pendens Hrk 5, complete genomephenylalanyl-tRNA synthetase, beta subunit6e-60232
NC_014507:2568933:2582890258289025845031614Methanoplanus petrolearius DSM 11571 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta2e-58227
NC_009464:300422:3070153070153086761662Uncultured methanogenic archaeon RC-I, complete genomephenylalanyl-tRNA synthetase, beta chain3e-54213
NC_013665:1392111:1411827141182714134881662Methanocella paludicola SANAE, complete genomephenylalanyl-tRNA synthetase beta chain7e-53208
NC_013158:1659426:1660931166093116626611731Halorhabdus utahensis DSM 12940, complete genomephenylalanyl-tRNA synthetase, beta subunit6e-52206
NC_013967:2760473:2779920277992027816321713Haloferax volcanii DS2 chromosome, complete genomephenylalanyl-tRNA synthetase beta subunit1e-50201
NC_006396:2625962:2627473262747326292271755Haloarcula marismortui ATCC 43049 chromosome I, complete sequencephenylalanyl-tRNA synthetase beta subunit2e-49197
NC_015416:1679188:1683687168368716853331647Methanosaeta concilii GP-6 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta4e-49196
NC_002607:1868371:1871265187126518729681704Halobacterium sp. NRC-1, complete genomephenylalanyl-tRNA synthetase beta subunit8e-48192
NC_013202:606204:6226906226906245011812Halomicrobium mukohataei DSM 12286, complete genomephenylalanyl-tRNA synthetase, beta subunit3e-42173
NC_014374:318528:3351343351343368101677Acidilobus saccharovorans 345-15 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta3e-40167
NC_016885:237682:2551342551342566811548Pyrobaculum oguniense TE7 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta2e-32140
NC_016070:1340500:1341133134113313426921560Thermoproteus tenax Kra 1, complete genomephenylalanyl-tRNA synthetase beta chain2e-31137
NC_009376:1633283:1642701164270116442481548Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta2e-30134
NC_009073:529148:5415175415175430641548Pyrobaculum calidifontis JCM 11548, complete genomephenylalanyl-tRNA synthetase, beta subunit6e-30132
NC_010525:612000:6290416290416305911551Thermoproteus neutrophilus V24Sta, complete genomephenylalanyl-tRNA synthetase, beta subunit6e-27122
NC_016645:20199:3848138481400371557Pyrobaculum sp. 1860 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta7e-27122
NC_004461:813748:8245798245798269812403Staphylococcus epidermidis ATCC 12228, complete genomePhe-tRNA synthetase beta chain7e-1789.4
NC_002976:707827:7186487186487210502403Staphylococcus epidermidis RP62A, complete genomephenylalanyl-tRNA synthetase, beta subunit1e-1688.6
NC_011979:3712845:3712845371284537152502406Geobacter sp. FRC-32, complete genomephenylalanyl-tRNA synthetase, beta subunit1e-1585.1
NC_008609:2446246:2484543248454324869872445Pelobacter propionicus DSM 2379, complete genomephenylalanyl-tRNA synthetase, beta subunit2e-1584.3
NC_019978:2071435:2084879208487920872782400Halobacteroides halobius DSM 5150, complete genomephenylalanyl-tRNA synthetase, beta subunit4e-1480.5
NC_019903:175481:1790921790921814972406Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,phenylalanyl-tRNA synthetase subunit beta4e-1480.1
NC_014554:1339566:1357970135797013603872418Lactobacillus plantarum subsp. plantarum ST-III chromosome,phenylalanyl-tRNA synthetase subunit beta6e-1479.7
NC_012658:3387774:3409565340956534119462382Clostridium botulinum Ba4 str. 657 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta7e-1479.7
NC_009483:3024115:3047613304761330500182406Geobacter uraniireducens Rf4 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta1e-1378.6
NC_009698:3185359:3202795320279532051762382Clostridium botulinum A str. Hall chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta2e-1378.2
NC_009697:3291500:3305688330568833080692382Clostridium botulinum A str. ATCC 19397 chromosome, completephenylalanyl-tRNA synthetase subunit beta2e-1378.2
NC_009495:3309550:3329699332969933320802382Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta2e-1378.2
NC_012563:3556763:3571778357177835741592382Clostridium botulinum A2 str. Kyoto, complete genomephenylalanyl-tRNA synthetase, beta subunit2e-1378.2
NC_010516:3368951:3390122339012233925032382Clostridium botulinum B1 str. Okra, complete genomephenylalanyl-tRNA synthetase, beta subunit2e-1378.2
NC_020291:2873000:2874324287432428767022379Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephenylalanine--tRNA ligase beta subunit PheT2e-1377.8
NC_012796:1049034:1176147117614711785522406Desulfovibrio magneticus RS-1, complete genomephenylalanyl-tRNA synthetase beta chain4e-1377
NC_008781:2981868:2989814298981429922402427Polaromonas naphthalenivorans CJ2, complete genomephenylalanyl-tRNA synthetase, beta subunit5e-1376.6
NC_014328:3747973:3761678376167837640592382Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephenylalanyl-tRNA synthetase subunit B1e-1172.4
NC_014758:310394:3359163359163382852370Calditerrivibrio nitroreducens DSM 19672 chromosome, completephenylalanyl-tRNA synthetase, beta subunit2e-1171.6
NC_013009:353690:3586733586733613032631Neorickettsia risticii str. Illinois, complete genomephenylalanyl-tRNA synthetase, beta subunit2e-1171.6
NC_004722:4496000:4505692450569245081122421Bacillus cereus ATCC 14579, complete genomephenylalanyl-tRNA synthetase beta subunit3e-1170.9
NC_006274:4408734:4415171441517144175912421Bacillus cereus E33L, complete genomephenylalanyl-tRNA synthetase beta subunit3e-1170.5
NC_011992:1505106:1520063152006315225072445Acidovorax ebreus TPSY, complete genomephenylalanyl-tRNA synthetase, beta subunit4e-1170.5
NC_003454:618290:6298886298886322842397Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completePhenylalanyl-tRNA synthetase beta chain5e-1170.1
NC_011772:4487378:4491863449186344942832421Bacillus cereus G9842, complete genomephenylalanyl-tRNA synthetase, beta subunit6e-1169.7
NC_006322:2886404:2898269289826929006832415Bacillus licheniformis ATCC 14580, complete genomephenylalanyl-tRNA synthetase beta subunit8e-1169.3
NC_006270:2886193:2898058289805829004722415Bacillus licheniformis ATCC 14580, complete genomephenylalanyl-tRNA synthetase beta subunit8e-1169.3
NC_007517:1561466:1583776158377615861812406Geobacter metallireducens GS-15, complete genomephenylalanyl-tRNA synthetase, beta subunit8e-1169.3
NC_014307:1619000:1620132162013216225612430Ralstonia solanacearum CFBP2957 chromosome, complete genomephenylalanine tRNA synthetase, beta-subunit8e-1169.3
NC_013959:1723037:1740185174018517425392355Sideroxydans lithotrophicus ES-1 chromosome, complete genomephenylalanyl-tRNA synthetase, beta subunit2e-1068.6
NC_014378:425779:4302074302074326062400Acetohalobium arabaticum DSM 5501 chromosome, complete genomephenylalanyl-tRNA synthetase, beta subunit2e-1068.2
NC_014910:2585747:2588145258814525905892445Alicycliphilus denitrificans BC chromosome, complete genomephenylalanyl-tRNA synthetase, beta subunit2e-1068.2
NC_003909:4333097:4341874434187443442942421Bacillus cereus ATCC 10987, complete genomephenylalanyl-tRNA synthetase beta subunit2e-1067.8
NC_007498:1666242:1670635167063516730492415Pelobacter carbinolicus DSM 2380, complete genomephenylalanyl-tRNA synthetase, beta subunit2e-1067.8
NC_014632:11925:1192511925143122388Ilyobacter polytropus DSM 2926 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta3e-1067.4
NC_011296:1365998:1365998136599813680762079Thermodesulfovibrio yellowstonii DSM 11347, complete genomephenylalanyl-tRNA synthetase, beta subunit5e-1066.6
NC_017515:1527461:1532093153209315344562364Neisseria meningitidis M04-240196 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta7e-1066.2
NC_007298:2856104:2867980286798028703642385Dechloromonas aromatica RCB, complete genomephenylalanyl-tRNA synthetase, beta subunit7e-1066.2
NC_007645:4677965:4692490469249046948622373Hahella chejuensis KCTC 2396, complete genomephenylalanyl-tRNA synthetase, beta subunit5e-0963.2
NC_017518:828662:8365538365538389162364Neisseria meningitidis NZ-05/33 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta7e-0962.8
NC_017514:1491235:1495867149586714982302364Neisseria meningitidis M01-240149 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta7e-0962.8
NC_013016:656000:6694116694116717742364Neisseria meningitidis alpha14 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta9e-0962.4
NC_016627:1485799:1525698152569815280882391Clostridium clariflavum DSM 19732 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta9e-0962.4
NC_008344:2434344:2451148245114824535262379Nitrosomonas eutropha C91, complete genomephenylalanyl-tRNA synthetase, beta subunit9e-0962.4
NC_003112:744476:7589347589347612972364Neisseria meningitidis MC58, complete genomephenylalanyl-tRNA synthetase beta subunit2e-0861.6
NC_017505:751836:7628367628367651992364Neisseria meningitidis alpha710 chromosome, complete genomeputative phenylalanyl-tRNA synthetase beta chain2e-0861.2
NC_014500:2589089:2589089258908925914762388Dickeya dadantii 3937 chromosome, complete genomephenylalanine tRNA synthetase, subunit beta2e-0861.2
NC_014972:1621850:1626345162634516287922448Desulfobulbus propionicus DSM 2032 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta5e-0860.1
NC_017516:1535904:1543993154399315463562364Neisseria meningitidis H44/76 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta4e-0860.1
NC_007086:1988000:1990079199007919924542376Xanthomonas campestris pv. campestris str. 8004, complete genomephenylalanyl-tRNA synthetase beta subunit4e-0860.1
NC_003902:2903493:2918765291876529211402376Xanthomonas campestris pv. campestris str. ATCC 33913, completephenylalanyl-tRNA synthetase subunit beta4e-0860.1
NC_002939:1634843:1666433166643316688382406Geobacter sulfurreducens PCA, complete genomephenylalanyl-tRNA synthetase, beta subunit4e-0860.1
NC_011283:2185462:2211172221117222135592388Klebsiella pneumoniae 342 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta6e-0859.7
NC_013166:1841446:1854713185471318570912379Kangiella koreensis DSM 16069, complete genomephenylalanyl-tRNA synthetase, beta subunit8e-0859.3
NC_016940:2843500:2863401286340128658962496Saprospira grandis str. Lewin chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta1e-0758.5
NC_008702:1153344:1166949116694911693392391Azoarcus sp. BH72, complete genomephenylalanyl-tRNA synthetase beta chain2e-0758.5
NC_013850:2103469:2144581214458121469682388Klebsiella variicola At-22 chromosome, complete genomephenylalanyl-tRNA synthetase, beta subunit3e-0757.4
NC_012779:1820244:1820244182024418226312388Edwardsiella ictaluri 93-146, complete genomephenylalanyl-tRNA synthetase, beta subunit, putative3e-0757.4
NC_017271:2906000:2921299292129929236742376Xanthomonas campestris pv. raphani 756C chromosome, completephenylalanyl-tRNA synthetase subunit beta3e-0757.4
NC_005071:786000:8044748044748069212448Prochlorococcus marinus str. MIT 9313, complete genomePhenylalanyl-tRNA synthetase beta subunit3e-0757.4
NC_015731:867377:9145679145679169392373Nitrosomonas sp. Is79A3 chromosome, complete genomephenylalanyl-tRNA synthetase subunit beta5e-0756.6
NC_012912:2216749:2237711223771122400982388Dickeya zeae Ech1591, complete genomephenylalanyl-tRNA synthetase, beta subunit5e-0756.6
NC_020063:2011019:2026936202693620293232388Enterobacteriaceae bacterium strain FGI 57, complete genomephenylalanyl-tRNA synthetase, beta subunit6e-0756.2
NC_016002:1326500:1331160133116013335202361Pseudogulbenkiania sp. NH8B, complete genomephenylalanyl-tRNA synthetase subunit beta5e-0653.1