Pre_GI: BLASTP Hits

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Query: NC_016846:24500:38222 Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,

Start: 38222, End: 39079, Length: 858

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009378:106193:114854114854115717864Yersinia pestis Pestoides F plasmid MT, complete sequencereplication protein9e-130462
NC_007607:87000:107005107005107862858Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceRepA7e-111400
NC_017319:192482:209331209331210188858Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceRepA4e-109394
NC_010660:175200:193116193116193973858Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIncFII replication initiation protein RepA14e-109394
NC_004851:191709:209448209448210305858Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceRepA, replication protein4e-109394
NC_007608:97092:112308112308113165858Shigella boydii Sb227 plasmid pSB4_227, complete sequenceRepA4e-109394
NC_011749:34056:510235102351892870Escherichia coli UMN026 plasmid p1ESCUM, complete sequencereplication protein4e-107387
NC_009787:17344:290512905129908858Escherichia coli E24377A plasmid pETEC_35, complete sequencereplication initiation protein RepA5e-107387
NC_012752:1:11840840Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidplasmid replication initiator protein2e-0860.1