Pre_GI: BLASTP Hits

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Query: NC_016830:5109953:5131208 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5131208, End: 5136184, Length: 4977

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:5109953:5116855511685551215794725Pseudomonas fluorescens F113 chromosome, complete genomeYD repeat protein01546
NC_010501:1629107:1634063163406316390394977Pseudomonas putida W619, complete genomeYD repeat protein0881
NC_010322:1623599:1627462162746216325315070Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein0741
NC_009512:4287605:4307156430715643123275172Pseudomonas putida F1, complete genomeYD repeat protein0716
NC_017986:1042642:1053283105328310571283846Pseudomonas putida ND6 chromosome, complete genomeYD repeat-/RHS repeat-containing protein0655
NC_009512:4287605:4295234429523442990793846Pseudomonas putida F1, complete genomeYD repeat-containing protein0655
NC_010322:1623599:1638966163896616429043939Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein2e-157557
NC_015733:1680500:1685350168535016891323783Pseudomonas putida S16 chromosome, complete genomeYD repeat/RHS repeat-containing protein2e-157557
NC_010694:614985:6149856149856199614977Erwinia tasmaniensis, complete genomeSimilar to Nematicidal protein 23e-137491
NC_012214:3502992:3519126351912635240904965Erwinia pyrifoliae Ep1/96, complete genomeNematicidal protein2e-126454
NC_014228:1712339:1716790171679017217544965Xenorhabdus nematophila ATCC 19061, complete genomeputative Nematicidal protein 24e-116421
NC_013892:2108175:2155453215545321598414389Xenorhabdus bovienii SS-2004 chromosome, complete genomeNematicidal protein 21e-102376
NC_010067:4418000:4427234442723444311303897Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-76289
NC_009668:46010:5085650856559525097Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceYD repeat-containing protein1e-64249
NC_009783:1665610:1681367168136716860464680Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein8e-58226
NC_013961:1246454:1259504125950412645945091Erwinia amylovora, complete genomeTeneurin-13e-55218
NC_013971:1283942:1297034129703413021245091Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein4e-55218
NC_013961:1246454:1254272125427212593655094Erwinia amylovora, complete genomeProtein rhsC precursor2e-43179
NC_013971:1283942:1291766129176612968955130Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein2e-43179
NC_004578:5623783:5636765563676556417745010Pseudomonas syringae pv. tomato str. DC3000, complete genomeYD repeat protein5e-42174
NC_010506:4951500:4969347496934749731503804Shewanella woodyi ATCC 51908, complete genomeYD repeat protein8e-41170
NC_012214:2673058:2684270268427026893635094Erwinia pyrifoliae Ep1/96, complete genomeSimilar to the nematicidal protein 22e-40169
NC_010694:2565580:2576972257697225820625091Erwinia tasmaniensis, complete genomeNematicidal protein 21e-40169
NC_012214:2673058:2679038267903826841285091Erwinia pyrifoliae Ep1/96, complete genomeSimilar to the nematicidal protein 21e-29133
NC_010694:2565580:2571660257166025767505091Erwinia tasmaniensis, complete genomeSimilar to the nematicidal protein 23e-21105
NC_015733:1680500:1684093168409316853251233Pseudomonas putida S16 chromosome, complete genomeYD repeat-containing protein1e-19100
NC_005085:2457295:2462175246217524632871113Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein3e-1999
NC_005085:2609934:2628514262851426296831170Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-1897.1
NC_002947:4805060:481730448173044818098795Pseudomonas putida KT2440, complete genomehypothetical protein3e-1792
NC_010506:4951500:4968117496811749693221206Shewanella woodyi ATCC 51908, complete genomehypothetical protein3e-1792
NC_007645:2842957:2860615286061528648984284Hahella chejuensis KCTC 2396, complete genomeRhs family protein9e-1790.5
NC_005085:2609934:2613466261346626145661101Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-1587
NC_012034:390273:3950643950644011716108Anaerocellum thermophilum DSM 6725, complete genomeYD repeat-containing protein1e-1483.2
NC_015589:2999735:3006147300614730112195073Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeYD repeat protein2e-1482.4
NC_013440:8590372:8593456859345685983274872Haliangium ochraceum DSM 14365, complete genomeYD repeat-containing protein7e-1377.8
NC_009012:1663357:1671219167121916769725754Clostridium thermocellum ATCC 27405, complete genomeYD repeat protein8e-1377.4
NC_007645:5747721:57599405759940577152811589Hahella chejuensis KCTC 2396, complete genomeRhs family protein3e-1275.5
NC_014363:1732417:1745909174590917506274719Olsenella uli DSM 7084 chromosome, complete genomeYD repeat protein8e-1274.3
NC_009012:3823879:3874387497025829Clostridium thermocellum ATCC 27405, complete genomeYD repeat containing protein1e-1173.9
NC_009012:1:3874387497025829Clostridium thermocellum ATCC 27405, complete genomeYD repeat containing protein1e-1173.9
NC_007355:4358074:4358074435807443643646291Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein9e-1273.9
NC_016791:3851454:38636243863624387462411001Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-1070.5
NC_009012:1663357:1664451166445116703305880Clostridium thermocellum ATCC 27405, complete genomeYD repeat protein3e-1068.9
NC_007645:2112622:21126222112622212455211931Hahella chejuensis KCTC 2396, complete genomeRhs family protein3e-1068.9
NC_020291:1725725:1742438174243817502977860Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeYD repeat protein4e-1068.6
NC_007530:1068000:1075334107533410820086675Bacillus anthracis str. 'Ames Ancestor', complete genomewall-associated protein, putative4e-1068.6
NC_003997:1068000:1075334107533410820086675Bacillus anthracis str. Ames, complete genomewall-associated protein, putative4e-1068.6
NC_016791:1620858:1642953164295316484275475Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein8e-1067.4
NC_015947:280095:2889822889822927343753Burkholderia sp. JV3 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-0967.4
NC_010688:2052619:2062268206226820659963729Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-0967.4
NC_016593:3116145:3122850312285031285165667Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein1e-0967
NC_009012:1:1255512555180775523Clostridium thermocellum ATCC 27405, complete genomeYD repeat containing protein2e-0966.6
NC_013722:2848366:2858130285813028635685439Xanthomonas albilineans, complete genomeputative rhs family protein3e-0965.9
NC_011071:10842:2076920769229852217Stenotrophomonas maltophilia R551-3, complete genomeYD repeat protein2e-0965.9
NC_003155:320979:3294523294523365467095Streptomyces avermitilis MA-4680, complete genomelarge secreted protein5e-0965.1
NC_015953:6212366:6222600622260062259413342Streptomyces sp. SirexAA-E chromosome, complete genomeYD repeat-containing protein5e-0964.7
NC_003909:1205605:1208901120890112156416741Bacillus cereus ATCC 10987, complete genomewall associated protein, putative8e-0964.3
NC_003552:2502689:2532488253248825338101323Methanosarcina acetivorans C2A, complete genomehypothetical protein1e-0863.5
NC_019978:1182056:1195795119579512013565562Halobacteroides halobius DSM 5150, complete genomeRHS repeat-associated core domain protein1e-0863.5
NC_014507:1610409:1610409161040916144524044Methanoplanus petrolearius DSM 11571 chromosome, complete genomeYD repeat protein1e-0863.5
NC_015572:4576778:4590353459035345939163564Methylomonas methanica MC09 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-0862
NC_014479:3825195:3842151384215138491677017Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecell wall-associated protein precursor4e-0862
NC_010995:1101614:1107559110755911159918433Cellvibrio japonicus Ueda107, complete genomeRHS Repeat family6e-0861.2
NC_020244:3856526:3862033386203338689656933Bacillus subtilis XF-1, complete genomecell wall-associated protein precursor6e-0861.2
NC_003552:2502689:2534487253448725411406654Methanosarcina acetivorans C2A, complete genomehypothetical protein9e-0860.8
NC_014976:2024364:2030409203040920374137005Bacillus subtilis BSn5 chromosome, complete genomewall-associated protein1e-0760.5
NC_004578:5623783:5633916563391656367682853Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-0760.5
NC_008463:1756434:1763497176349717662082712Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-0760.1
NC_016627:2870900:28730942873094288521612123Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-0760.1
NC_019892:865500:8770318770318821095079Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-0759.7
NC_014393:4352216:43633464363346437395010605Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein2e-0759.3
NC_014393:691000:6932956932957031619867Clostridium cellulovorans 743B chromosome, complete genomeYD repeat-containing protein2e-0759.3
NC_020410:3715210:3723300372330037302596960Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completecell wall-associated protein precursor3e-0759.3
NC_013216:3061491:3079669307966930834843816Desulfotomaculum acetoxidans DSM 771, complete genomeYD repeat protein3e-0758.9
NC_018080:2732962:2740330274033027431252796Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-0758.5
NC_014392:355443:3600883600883675987511Caldicellulosiruptor obsidiansis OB47 chromosome, complete genome5e-0758.5
NC_000964:4015005:4022562402256240295667005Bacillus subtilis subsp. subtilis str. 168, complete genomecell wall-associated protein precursor (CWBP200, 105, 62)6e-0758.2
NC_019940:1932906:1941658194165819458364179Thioflavicoccus mobilis 8321 chromosome, complete genomeRHS repeat-associated core domain-containing protein6e-0758.2
NC_009012:3823879:3832532383253238375415010Clostridium thermocellum ATCC 27405, complete genomeYD repeat protein5e-0758.2
NC_017195:3815491:3822752382275238297597008Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRHS Repeat family5e-0758.2
NC_020126:2299150:2316574231657423250128439Myxococcus stipitatus DSM 14675, complete genomehypothetical protein7e-0757.8
NC_002939:47406:5392553925602786354Geobacter sulfurreducens PCA, complete genomesalmonella virulence plasmid 65kDa B protein /YD repeat protein1e-0656.6
NC_017030:5785681:5790705579070557970856381Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein2e-0656.6
NC_011567:2468708:2479021247902124807121692Anoxybacillus flavithermus WK1, complete genomeRhs family protein2e-0656.2
NC_011567:2468708:2482768248276824880775310Anoxybacillus flavithermus WK1, complete genomeRhs family protein2e-0656.2
NC_015968:4790239:4800522480052248053034782Enterobacter asburiae LF7a chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-0655.8
NC_016791:2888319:2900361290036129086378277Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-0655.8
NC_016627:1723104:1755569175556917598014233Clostridium clariflavum DSM 19732 chromosome, complete genome3e-0655.8
NC_019842:3755275:3769085376908537761167032Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,wall-associated protein8e-0654.3
NC_002973:461712:4675164675164741036588Listeria monocytogenes str. 4b F2365, complete genomewall-associated protein, putative9e-0653.9
NC_015711:3193774:3203507320350732105297023Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein1e-0553.9