Pre_GI Gene

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Host: NC_010322 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010322:1623599 Pseudomonas putida GB-1 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
162359916246811083fimbrial proteinQuickGO ontologyBLASTP
162467816272032526fimbrial biogenesis outer membrane usher proteinQuickGO ontologyBLASTP
162746216325315070YD repeat-containing proteinQuickGO ontologyBLASTP
163252816337631236hypothetical proteinBLASTP
163595416389412988hypothetical proteinBLASTP
163896616429043939YD repeat-containing proteinQuickGO ontologyBLASTP
164334216451201779hypothetical proteinBLASTP