Pre_GI Gene

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Host: NC_009012 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009012:3823879 Clostridium thermocellum ATCC 27405, complete genome

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10417231620RecombinaseQuickGO ontologyBLASTP
18832602720hypothetical proteinBLASTP
25993528930ankyrin repeat proteinQuickGO ontologyBLASTP
387497025829YD repeat containing proteinQuickGO ontologyBLASTP
38238793824391513hypothetical proteinBLASTP
38246383825426789copper amine oxidase-like proteinQuickGO ontologyBLASTP
38256053826408804copper amine oxidase-like proteinQuickGO ontologyBLASTP
38264823827282801copper amine oxidase-like proteinQuickGO ontologyBLASTP
382746538286821218transposase IS4QuickGO ontologyBLASTP
382872238316102889hypothetical proteinBLASTP
38318813832360480hypothetical protein
383253238375415010YD repeat proteinQuickGO ontologyBLASTP
38382523838992741hypothetical protein
38390353839820786hypothetical protein
38399723840922951hypothetical proteinBLASTP
38413173841622306hypothetical proteinBLASTP
384162738430181392Relaxasemobilization nuclease domain containing proteinQuickGO ontologyBLASTP
38430343843276243hypothetical protein