Pre_GI: BLASTP Hits

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Query: NC_016830:3230939:3230939 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3230939, End: 3231829, Length: 891

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:5797044:579944357994435800345903Pseudomonas putida ND6 chromosome, complete genomeUspA domain-containing protein9e-82303
NC_009512:2782000:280088428008842801774891Pseudomonas putida F1, complete genomeUspA domain protein1e-81303
NC_007492:3801237:381465238146523815599948Pseudomonas fluorescens PfO-1, complete genomeuniversal stress protein family1e-58226
NC_007492:3801237:381641738164173817334918Pseudomonas fluorescens PfO-1, complete genomeUspA8e-55214
NC_007492:3801237:381886338188633819786924Pseudomonas fluorescens PfO-1, complete genomeUspA2e-40166
NC_009092:2282437:230575023057502306682933Shewanella loihica PV-4, complete genomeUspA domain protein6e-29128
NC_009052:2512373:255539525553952556327933Shewanella baltica OS155, complete genomeUspA domain protein2e-24113
NC_016513:1568401:158091015809101581842933Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeuniversal stress protein UspE1e-22107
NC_013416:1246880:125933612593361260268933Aggregatibacter actinomycetemcomitans D11S-1, complete genomeUspA protein1e-22107
NC_006905:1766000:176844317684431769390948Salmonella enterica subsp. enterica serovar Choleraesuis strputative universal stress protein5e-22105
NC_003197:1753663:175527717552771756224948Salmonella typhimurium LT2, complete genomeputative universal stress protein5e-22105
NC_011149:1429523:144690614469061447853948Salmonella enterica subsp. enterica serovar Agona str. SL483,universal stress protein E5e-22105
NC_006511:1273162:129054812905481291495948Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-22105
NC_011094:1726000:172845717284571729404948Salmonella enterica subsp. enterica serovar Schwarzengrund struniversal stress protein UspE5e-22105
NC_011147:1267005:128439112843911285338948Salmonella enterica subsp. enterica serovar Paratyphi A struniversal stress protein UspE5e-22105
NC_016810:1709695:171213017121301713077948Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-22105
NC_016856:1763640:176525417652541766201948Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Suniversal stress protein UspE5e-22105
NC_016857:1709695:171213017121301713077948Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74universal stress protein UspE5e-22105
NC_016860:1752000:175296817529681753915948Salmonella enterica subsp. enterica serovar Typhimurium struniversal stress protein UspE5e-22105
NC_016863:1711832:171344617134461714393948Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1universal stress protein UspE5e-22105
NC_017046:1709578:171201317120131712960948Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-22105
NC_011080:1750000:175163217516321752579948Salmonella enterica subsp. enterica serovar Newport str. SL254,universal stress protein E4e-22105
NC_009792:1345500:136235213623521363302951Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-22104
NC_004631:1623511:162594616259461626893948Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-22104
NC_003198:1336894:135428913542891355236948Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein7e-22104
NC_008258:1873805:187470918747091875659951Shigella flexneri 5 str. 8401, complete genomehypothetical protein7e-22104
NC_012913:772641:782800782800783732933Aggregatibacter aphrophilus NJ8700, complete genomeUspA protein1e-21103
NC_015761:1630000:164761716476171648564948Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-21103
NC_012214:1974500:201307320130732014023951Erwinia pyrifoliae Ep1/96, complete genomeUniversal stress protein YdaA3e-1995.9
NC_009512:2782000:279978727997872800665879Pseudomonas putida F1, complete genomeUspA domain protein7e-1684.7
NC_017986:5797044:580056458005645801442879Pseudomonas putida ND6 chromosome, complete genomeUspA domain-containing protein7e-1684.7
NC_014315:1249071:126177912617791262711933Nitrosococcus watsoni C-113 chromosome, complete genomeUspA domain-containing protein1e-1273.9
NC_016614:1178000:120977412097741210709936Vibrio sp. EJY3 chromosome 2, complete sequenceuniversal stress protein family 11e-0964.3
NC_008345:3287000:328852632885263289407882Shewanella frigidimarina NCIMB 400, complete genomehypothetical protein9e-0857.8
NC_007492:3801237:381447338144733814655183Pseudomonas fluorescens PfO-1, complete genomeuniversal stress protein family4e-0652.4