Pre_GI: BLASTP Hits

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Query: NC_016822:1339058:1362308 Shigella sonnei 53G, complete genome

Start: 1362308, End: 1364368, Length: 2061

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007384:1355060:1379459137945913815192061Shigella sonnei Ss046, complete genomeprotease II01399
NC_008258:1873805:1891272189127218933322061Shigella flexneri 5 str. 8401, complete genomeprotease II01385
NC_012125:1897611:1897611189761118996622052Salmonella enterica subsp. enterica serovar Paratyphi C strainprotease 201255
NC_010102:1137247:1137247113724711392982052Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein01254
NC_011094:1923870:1950368195036819524192052Salmonella enterica subsp. enterica serovar Schwarzengrund strprotease 201254
NC_011294:1220526:1220526122052612225772052Salmonella enterica subsp. enterica serovar Enteritidis strprotease 201254
NC_016860:1943203:1967346196734619693972052Salmonella enterica subsp. enterica serovar Typhimurium strprotease 201253
NC_003197:1945858:1971805197180519738562052Salmonella typhimurium LT2, complete genomeprotease II01253
NC_011205:1345511:1345511134551113475622052Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853protease 201253
NC_016810:1903426:1929373192937319314242052Salmonella enterica subsp. enterica serovar Typhimurium stroligopeptidase01253
NC_016856:1957263:1983210198321019852612052Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sprotease 201253
NC_016857:1903426:1929373192937319314242052Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74protease 201253
NC_016863:1905454:1931401193140119334522052Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1protease 201253
NC_017046:1902788:1928736192873619307872052Salmonella enterica subsp. enterica serovar Typhimurium str. 798oligopeptidase01253
NC_011147:1057259:1057259105725910593102052Salmonella enterica subsp. enterica serovar Paratyphi A strprotease 201252
NC_006511:1063249:1063249106324910653002052Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCColigopeptidase01252
NC_011080:1944226:1977428197742819794792052Salmonella enterica subsp. enterica serovar Newport str. SL254,protease 201252
NC_013850:1887556:1888339188833918903992061Klebsiella variicola At-22 chromosome, complete genomeOligopeptidase B01158
NC_016816:2073677:2073677207367720757492073Pantoea ananatis LMG 5342, complete genomeprotease II PtrB0984
NC_015566:2039431:2039431203943120414642034Serratia sp. AS12 chromosome, complete genomeOligopeptidase B0906
NC_015567:2039443:2039443203944320414762034Serratia sp. AS9 chromosome, complete genomeOligopeptidase B0906
NC_010159:1668795:1681761168176116838122052Yersinia pestis Angola, complete genomeprotease II0890
NC_010634:2004653:2007624200762420096752052Yersinia pseudotuberculosis PB1/+, complete genomepeptidase S9 prolyl oligopeptidase0887
NC_013421:2306000:2311101231110123131522052Pectobacterium wasabiae WPP163, complete genomeOligopeptidase B0883
NC_015061:3111211:3133925313392531359642040Rahnella sp. Y9602 chromosome, complete genomeOligopeptidase B0882
NC_012912:2553391:2565838256583825678892052Dickeya zeae Ech1591, complete genomeOligopeptidase B0848
NC_013222:817686:8513938513938535342142Robiginitalea biformata HTCC2501, complete genomeProtease II2e-170600
NC_015914:621411:6240896240896261762088Cyclobacterium marinum DSM 745 chromosome, complete genomepeptidase S9A prolyl oligopeptidase domain-containing protein beta-propeller4e-168592
NC_010501:4311873:4325573432557343276152043Pseudomonas putida W619, complete genomeOligopeptidase B1e-129464
NC_007925:1448726:1448726144872614508792154Rhodopseudomonas palustris BisB18, complete genomeOligopeptidase B6e-118425
NC_010793:1075388:1097935109793510999952061Orientia tsutsugamushi str. Ikeda, complete genomeprotease II3e-117422
NC_009488:327285:3441343441343461882055Orientia tsutsugamushi str. Boryong, complete genomeoligopeptidase B9e-116418
NC_012982:1282856:1282856128285612849942139Hirschia baltica ATCC 49814, complete genomeOligopeptidase B2e-115416
NC_002677:2642860:2642860264286026450342175Mycobacterium leprae TN, complete genomeprotease II4e-115416
NC_016642:2573481:2578333257833325804262094Pseudovibrio sp. FO-BEG1 chromosome, complete genomeprotease 2/Oligopeptidase B4e-113409
NC_020911:1776670:1800761180076118028692109Octadecabacter antarcticus 307, complete genomeprotease II3e-112406
NC_009879:860925:8609258609258629792055Rickettsia canadensis str. McKiel, complete genomeProtease II7e-112405
NC_016929:851044:8510448510448530982055Rickettsia canadensis str. CA410 chromosome, complete genomeprotease II3e-111403
NC_002678:4885790:4924742492474249268592118Mesorhizobium loti MAFF303099, complete genomedipeptidyl aminopeptidase1e-72274
NC_015067:459626:4903104903104928262517Bifidobacterium longum subsp. longum JCM 1217, complete genomeprotease2e-63243
NC_014169:515957:5378785378785401482271Bifidobacterium longum subsp. longum JDM301 chromosome, completeoligopeptidase B3e-63243
NC_014501:5775547:5775547577554757776282082Cyanothece sp. PCC 7822 chromosome, complete genomeProlyl oligopeptidase8e-50199
NC_020126:2883194:2899969289996929020382070Myxococcus stipitatus DSM 14675, complete genomeprolyl oligopeptidase9e-50199
NC_011729:812594:8314938314938335592067Cyanothece sp. PCC 7424 chromosome, complete genomeprolyl oligopeptidase8e-49195
NC_007512:865500:8945118945118967122202Pelodictyon luteolum DSM 273, complete genomeProlyl oligopeptidase2e-43177
NC_013730:2558999:2591158259115825933202163Spirosoma linguale DSM 74, complete genome1e-40168
NC_011027:760221:7712647712647734412178Chlorobaculum parvum NCIB 8327, complete genomeProlyl oligopeptidase5e-40166
NC_009337:1200722:1202443120244312046412199Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeprolyl oligopeptidase4e-36153
NC_013595:4758034:4760696476069647628132118Streptosporangium roseum DSM 43021, complete genomeProlyl oligopeptidase3e-34147
NC_010524:4402478:4426402442640244285102109Leptothrix cholodnii SP-6, complete genomeProlyl oligopeptidase4e-30133
NC_019673:1384795:1402726140272614049962271Saccharothrix espanaensis DSM 44229 complete genomeProlyl oligopeptidase8e-29129
NC_010645:3720501:3720501372050137225942094Bordetella avium 197N, complete genomeprolyl endopeptidase8e-27122
NC_012470:580373:5928725928725948181947Streptococcus equi subsp. zooepidemicus, complete genomeprolyl oligopeptidase family protein9e-27122
NC_013131:8480384:8522720852272085248492130Catenulispora acidiphila DSM 44928, complete genomeProlyl oligopeptidase1e-24115
NC_006624:324267:3485733485733504231851Thermococcus kodakarensis KOD1, complete genomeprolyl endopeptidase7e-24112
NC_009921:6691089:6720875672087567229322058Frankia sp. EAN1pec, complete genomeProlyl oligopeptidase3e-23110
NC_000963:205546:2055462055462077142169Rickettsia prowazekii str. Madrid E, complete genomePROBABLE PEPTIDASE Y4NA (ppcE)6e-23109
NC_017048:547712:5477125477125498802169Rickettsia prowazekii str. GvV257 chromosome, complete genomepeptidase6e-23109
NC_017049:203748:2037482037482059162169Rickettsia prowazekii str. Chernikova chromosome, complete genomepeptidase6e-23109
NC_017050:205547:2055472055472077152169Rickettsia prowazekii str. Katsinyian chromosome, complete genomepeptidase6e-23109
NC_017051:203752:2037522037522059202169Rickettsia prowazekii str. Dachau chromosome, complete genomepeptidase6e-23109
NC_017056:205558:2055582055582077262169Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomepeptidase6e-23109
NC_017057:205771:2057712057712079392169Rickettsia prowazekii str. RpGvF24 chromosome, complete genomepeptidase6e-23109
NC_015567:2328782:2330730233073023328922163Serratia sp. AS9 chromosome, complete genomeProlyl oligopeptidase6e-22106
NC_015566:2328771:2330719233071923328812163Serratia sp. AS12 chromosome, complete genomeProlyl oligopeptidase6e-22106
NC_004369:371109:3856223856223876762055Corynebacterium efficiens YS-314, complete genomeputative peptidase7e-2099.4
NC_015675:6423000:6423513642351364256422130Mesorhizobium opportunistum WSM2075 chromosome, complete genomeProlyl oligopeptidase3e-1274.3
NC_014923:5868000:5868842586884258709712130Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeProlyl oligopeptidase3e-1274.3
NC_019973:5797000:5797802579780257999312130Mesorhizobium australicum WSM2073, complete genomeserine protease, S9A family peptidase3e-1274.3
NC_011894:7421867:7443512744351274455872076Methylobacterium nodulans ORS 2060, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein8e-1272.8