Pre_GI: BLASTP Hits

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Query: NC_016446:522936:541850 Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete

Start: 541850, End: 542569, Length: 720

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:861225:880101880101880862762Vibrio cholerae O395 chromosome chromosome II, complete sequencetranscriptional regulator, LuxR family2e-138491
NC_012580:796387:815262815262816023762Vibrio cholerae M66-2 chromosome II, complete sequencetranscriptional regulator, LuxR family2e-138491
NC_009456:383819:383080383080383841762Vibrio cholerae O395 chromosome 1, complete sequenceLuxR family transcriptional regulator2e-138491
NC_002506:822401:841276841276842037762Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completetranscriptional regulator, LuxR family2e-138491
NC_012667:504534:503795503795504547753Vibrio cholerae MJ-1236 chromosome 2, complete genometranscriptional regulator LuxR family2e-138491
NC_016945:822229:841143841143841862720Vibrio cholerae IEC224 chromosome II, complete sequenceLuxR family transcriptional regulator3e-138490
NC_013446:2961647:296590429659042966623720Comamonas testosteroni CNB-2, complete genometranscriptional regulator, luxR family8e-69259
NC_008027:2996947:301528030152803015987708Pseudomonas entomophila L48, complete genometranscriptional regulator, luxR family3e-67254
NC_016027:2580477:258117025811702581910741Gluconacetobacter xylinus NBRC 3288, complete genomeLuxR family transcriptional regulator3e-62238
NC_010943:1884695:188720418872041887908705Stenotrophomonas maltophilia K279a, complete genomeputative LuxR family transcriptional regulatory protein8e-56216
NC_010514:6000:278042780428550747Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, completetranscriptional regulator, LuxR family8e-1373.9
NC_004463:1992000:203431920343192035080762Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein4e-1065.1
NC_007761:3047321:304927530492753050057783Rhizobium etli CFN 42, complete genomeautoinducer transcriptional regulator protein1e-0963.5
NC_014923:2672000:267549126754912676213723Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein1e-0963.5
NC_015675:2839000:284249128424912843213723Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator1e-0963.5
NC_019973:2744000:274754427475442748266723Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain1e-0963.5
NC_007778:3784104:379951837995183800240723Rhodopseudomonas palustris HaA2, complete genometranscriptional regulator, LuxR family3e-0962
NC_020453:1025891:102750510275051028296792Agromonas oligotrophica S58 DNA, complete genomehypothetical protein6e-0961.2
NC_017249:8221992:822574082257408226213474Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator4e-0858.5
NC_010172:5036385:503965450396545040385732Methylobacterium extorquens PA1, complete genomeAutoinducer-binding domain protein1e-0757
NC_012988:5516872:552180955218095522306498Methylobacterium extorquens DM4, complete genomeN-acylhomoserine lactone LuxR family transcriptional regulator2e-0755.8
NC_020453:6821500:683645968364596837193735Agromonas oligotrophica S58 DNA, complete genometranscriptional regulator, LuxR family3e-0755.5
NC_015589:3241364:325205832520583252759702Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeresponse regulator receiver2e-0653.1
NC_003888:7866148:787537478753747876051678Streptomyces coelicolor A3(2), complete genometwo-component system response regulator2e-0653.1
NC_015259:734795:739811739811740503693Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative N-acyl homoserine lactone transcriptional regulator, LuxR-like protein2e-0653.1
NC_015259:485015:532878532878533531654Polymorphum gilvum SL003B-26A1 chromosome, complete genomeLuxR family transcriptional regulator2e-0652.8
NC_015637:325561:342547342547343269723Vibrio anguillarum 775 chromosome chromosome II, complete sequenceLuxR family transcriptional regulator2e-0652.4
NC_014834:614890:624618624618625346729Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein4e-0652
NC_014834:2206119:223396822339682234687720Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein4e-0651.6