Pre_GI: BLASTP Hits

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Query: NC_015975:1936504:1953700 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Start: 1953700, End: 1954119, Length: 420

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008261:967973:969127969127970107981Clostridium perfringens ATCC 13124, complete genomePTS system, mannose/fructose/sorbose family, IIB component2e-21100
NC_010723:1379256:139787513978751398852978Clostridium botulinum E3 str. Alaska E43, complete genomePTS system, mannose/fructose/sorbose family, IIB component3e-2097.1
NC_015975:1936504:195217819521781953164987Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS system, mannose-specific IIAB component5e-2096.3
NC_015425:841754:863224863224863643420Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIA1e-1995.1
NC_015061:3147691:314769131476913148653963Rahnella sp. Y9602 chromosome, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit3e-1994
NC_017047:3212000:321229332122933213255963Rahnella aquatilis HX2 chromosome, complete genomePTS system mannose-specific transporter subunit IIAB3e-1994
NC_016818:3148000:314822731482273149189963Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system mannose/fructose/sorbose family transporter subunit IIB3e-1993.6
NC_011660:2509362:251816925181692519134966Listeria monocytogenes HCC23 chromosome, complete genomePTS system mannose-specific eiiab component (eiiab-man)1e-1891.7
NC_013504:1648551:165705116570511658046996Lactobacillus johnsonii FI9785 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probably mannose specific1e-1891.7
NC_005362:1870620:187806118780611879056996Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific1e-1891.7
NC_008530:1775841:178186117818611782859999Lactobacillus gasseri ATCC 33323, complete genomePhosphotransferase system, mannose/fructose-specific component IIA2e-1890.9
NC_012880:2399205:240136324013632402304942Dickeya dadantii Ech703, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit6e-1889.4
NC_009617:4436837:445280944528094453231423Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIA8e-1785.5
NC_016612:2902628:292817629281762928607432Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system mannose-specific transporter subunit IIAB7e-1682.8
NC_014106:419511:4506944506944517011008Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IIAB component1e-1582
NC_015602:1339067:1346038134603813470451008Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeprotein-N(pi)-phosphohistidine--sugar phosphotransferase6e-1579.3
NC_014724:439594:4752374752374762471011Lactobacillus amylovorus GRL 1112 chromosome, complete genomePTS system, mannose-specific IIAB component1e-1478.2
NC_015214:437733:4748524748524758621011Lactobacillus acidophilus 30SC chromosome, complete genomePTS system, mannose-specific IIAB component3e-1477
NC_013192:2434664:245430424543042454747444Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit6e-1476.3
NC_015389:809474:819101819101819532432Coriobacterium glomerans PW2 chromosome, complete genomePTS system fructose subfamily IIA component2e-1374.7
NC_015389:1782825:180551718055171805924408Coriobacterium glomerans PW2 chromosome, complete genomePTS system fructose subfamily IIA component3e-1373.9
NC_018528:1681060:1689111168911116901211011Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannost-specific transporter subunits IIAB4e-1373.6
NC_015519:270637:289790289790290194405Tepidanaerobacter sp. Re1 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA1e-1272
NC_013192:469771:485291485291486280990Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit3e-1270.5
NC_015389:1070500:110468411046841105109426Coriobacterium glomerans PW2 chromosome, complete genomePTS system fructose subfamily IIA component3e-1270.5
NC_009089:581655:581655581655582062408Clostridium difficile 630, complete genomePTS system, IIa component7e-1165.9
NC_010814:2275199:231105023110502311442393Geobacter lovleyi SZ, complete genomePTS system fructose subfamily IIA component1e-1065.1
NC_014100:172452:193231193231193665435Caulobacter segnis ATCC 21756 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA2e-1064.7
NC_015186:597695:605052605052605474423Acidiphilium multivorum AIU301, complete genomephosphotransferase system enzyme IIA component4e-1063.5
NC_009484:489398:496105496105496527423Acidiphilium cryptum JF-5 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA4e-1063.5
NC_014376:4369666:437413143741314374700570Clostridium saccharolyticum WM1 chromosome, complete genomePTS system fructose subfamily IIA component6e-1062.8
NC_014377:1897857:191152019115201911942423Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system fructose subfamily IIA component6e-0959.3
NC_014377:1897857:190872119087211909122402Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system fructose subfamily IIA component7e-0959.3
NC_011274:4577402:460040146004014600823423Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91PTS transport system transporter subunit IIA1e-0858.9
NC_011294:4604283:462715046271504627572423Salmonella enterica subsp. enterica serovar Enteritidis strPTS system transporter subunit A1e-0858.9
NC_014758:1489761:149157014915701491968399Calditerrivibrio nitroreducens DSM 19672 chromosome, completepts system fructose subfamily iia component2e-0858.2
NC_012559:2854640:285779828577982858199402Laribacter hongkongensis HLHK9, complete genomeProbable protein-N p-phosphohistidine-sugar phosphotransferase3e-0857.4
NC_014844:1634985:165915616591561659611456Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomePTS system fructose subfamily IIA component1e-0755.5
NC_009442:1158268:116773711677371168171435Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose-specific component IIA1e-0755.1
NC_011742:3799788:380937038093703809771402Escherichia coli S88 chromosome, complete genomePTS system mannose/fructose-specific transporter subunit IIA2e-0754.7
NC_010380:124655:148006148006148410405Streptococcus pneumoniae Hungary19A-6, complete genomephosphotransferase system sugar-specific EII component2e-0754.3
NC_016023:875416:885860885860886300441Bacillus coagulans 36D1 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA9e-0752.4
NC_012962:869295:884325884325884759435Photorhabdus asymbiotica, complete genomesimilar to putative pts system iia component yadi of escherichia coli2e-0651.2
NC_010067:1116148:112740711274071127847441Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0650.8