Pre_GI: BLASTP Hits

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Query: NC_015848:1708176:1725470 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1725470, End: 1726768, Length: 1299

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:2704350:2707546270754627088441299Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein2e-172605
NC_012943:2707677:2710873271087327121711299Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein2e-172605
NC_009525:1685522:1702812170281217041101299Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein2e-172605
NC_019950:1689910:1706055170605517073531299Mycobacterium canettii CIPT 140060008 complete genomeConserved membrane protein of unknown function2e-172605
NC_000962:1684005:1701295170129517025931299Mycobacterium tuberculosis H37Rv, complete genomeconserved probable membrane protein2e-172605
NC_009565:1688642:1705932170593217072301299Mycobacterium tuberculosis F11, complete genomehypothetical protein2e-172605
NC_017026:1686500:1702357170235717036281272Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein4e-166584
NC_002755:1684161:170145117014511701969519Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein4e-82305
NC_002755:1684161:170197817019781702748771Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein3e-79295
NC_004369:371109:3829443829443842121269Corynebacterium efficiens YS-314, complete genomehypothetical protein4e-29129
NC_015145:2693749:2700292270029227014551164Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehypothetical protein7e-22105
NC_007164:2261644:2261644226164422629181275Corynebacterium jeikeium K411, complete genomehypothetical protein2e-20100