Pre_GI: BLASTP Hits

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Query: NC_015761:1970042:1980567 Salmonella bongori NCTC 12419, complete genome

Start: 1980567, End: 1982456, Length: 1890

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012969:2136243:218866821886682189555888Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein7e-22106
NC_004605:1385444:140619014061901406597408Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative OspC21e-21105
NC_010067:632683:6519156519156548302916Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1686.7
NC_012969:2136243:2160685216068521624811797Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein7e-1686.3
NC_010660:175200:1990601990602005141455Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceOspC22e-1584.3
NC_007608:97092:1168041168041182581455Shigella boydii Sb227 plasmid pSB4_227, complete sequenceOspC22e-1584.3
NC_014762:2428721:243479724347972435513717Sulfuricurvum kujiense DSM 16994 chromosome, complete genomehypothetical protein5e-1583.2
NC_013192:1033177:1045393104539310464601068Leptotrichia buccalis DSM 1135, complete genomehypothetical protein6e-1479.7
NC_007607:87000:1173141173141187681455Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceOspC38e-1375.9
NC_010660:86445:8802788027894811455Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceOspC31e-1275.5
NC_017177:136082:1456741456741477492076Clostridium difficile BI1, complete genomehypothetical protein1e-1275.1
NC_017177:91993:1021481021481044662319Clostridium difficile BI1, complete genomehypothetical protein2e-1274.7
NC_017177:175000:1817061817061832891584Clostridium difficile BI1, complete genomehypothetical protein4e-1170.5
NC_015578:2341026:2366628236662823696092982Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein1e-0965.9
NC_017177:91993:977499774998573825Clostridium difficile BI1, complete genomehypothetical protein1e-0965.5
NC_014638:363577:3806973806973835072811Bifidobacterium bifidum PRL2010 chromosome, complete genomehypothetical protein1e-0965.5
NC_017177:175000:1866711866711876751005Clostridium difficile BI1, complete genomehypothetical protein7e-0963.2
NC_017177:91993:111492111492112439948Clostridium difficile BI1, complete genomehypothetical protein2e-0861.6
NC_017177:175000:177542177542178420879Clostridium difficile BI1, complete genomehypothetical protein2e-0861.2
NC_017177:136082:152286152286152945660Clostridium difficile BI1, complete genomehypothetical protein3e-0860.8
NC_017177:91993:1083451083451093671023Clostridium difficile BI1, complete genomehypothetical protein5e-0860.1
NC_017177:91993:100130100130100612483Clostridium difficile BI1, complete genomehypothetical protein7e-0859.7
NC_017177:175000:1795451795451805911047Clostridium difficile BI1, complete genomehypothetical protein3e-0757.4
NC_012969:2136243:219127521912752191862588Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein8e-0755.8