Pre_GI: BLASTP Hits

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Query: NC_015733:715947:722170 Pseudomonas putida S16 chromosome, complete genome

Start: 722170, End: 722439, Length: 270

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:1677811:168665616866561686889234Azotobacter vinelandii CA6, complete genomeProphage CP4-57 regulatory , AlpA-like protein5e-1476.3
NC_012560:1677798:168664316866431686876234Azotobacter vinelandii DJ, complete genomeProphage CP4-57 regulatory , AlpA-like protein5e-1476.3
NC_016944:514742:530410530410530610201Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator1e-0755.1
NC_012668:83641:897378973789937201Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator1e-0755.1
NC_002505:514732:530402530402530602201Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator1e-0755.1
NC_009901:1516340:153082715308271531030204Shewanella pealeana ATCC 700345, complete genomephage transcriptional regulator, AlpA3e-0753.9
NC_014306:4376012:441108144110814411347267Erwinia billingiae Eb661, complete genomePhage transcriptional regulator, AlpA-family7e-0752.8
NC_012660:5571500:557986255798625580539678Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein7e-0752.8
NC_010468:49074:496614966149927267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA7e-0752.8
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA7e-0752.8
NC_010498:4072681:408781140878114088077267Escherichia coli SMS-3-5, complete genomeAlpA family transcriptional regulator8e-0752.4
NC_010468:1130000:115080511508051151071267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA8e-0752.4
NC_007613:4217557:422168542216854221951267Shigella boydii Sb227, complete genomehypothetical protein8e-0752.4
NC_011740:448000:452630452630452896267Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein of bacteriophage origin, putative COG3311, putative DNA binding8e-0752.4
NC_013361:4959323:495991949599194960185267Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA binding transcriptional regulator8e-0752.4
NC_007722:2993852:299950229995022999717216Erythrobacter litoralis HTCC2594, complete genomehypothetical protein1e-0652
NC_007347:2421942:242194224219422422205264Ralstonia eutropha JMP134 chromosome 1, complete sequenceProphage CP4-57 regulatory1e-0651.6
NC_020211:996497:100966210096621009928267Serratia marcescens WW4, complete genomehypothetical protein4e-0650.4