Pre_GI: BLASTP Hits

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Query: NC_015733:4130000:4140692 Pseudomonas putida S16 chromosome, complete genome

Start: 4140692, End: 4141909, Length: 1218

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:3987615:3992949399294939942741326Pseudomonas putida W619, complete genomeintegrase family protein1e-180632
NC_008027:1847040:1862344186234418636361293Pseudomonas entomophila L48, complete genomeintegrase4e-160564
NC_015410:2258800:2276000227600022773761377Pseudomonas mendocina NK-01 chromosome, complete genomeintegrase family protein3e-137488
NC_015740:2614317:263366526336652634567903Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein9e-37154
NC_010524:1005355:1017147101714710183131167Leptothrix cholodnii SP-6, complete genomeintegrase family protein5e-34145
NC_014844:2828370:2841263284126328429511689Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein4e-30132
NC_012796:2041579:2048611204861120503621752Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase7e-30131
NC_012796:2683711:2690065269006526917561692Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase5e-29129
NC_011146:3426500:3474592347459234759021311Geobacter bemidjiensis Bem, complete genomeintegrase family protein2e-28127
NC_014117:132524:1736441736441747381095Burkholderia sp. CCGE1002 chromosome chromosome 1, completeintegrase family protein1e-27124
NC_014541:1231021:1236294123629412375351242Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein2e-27123
NC_009952:2217877:2223872222387222254611590Dinoroseobacter shibae DFL 12, complete genomeputative integrase5e-26119
NC_013854:1686997:1697457169745716991721716Azospirillum sp. B510, complete genomephage integrase family protein2e-25117
NC_008609:1394377:1408298140829814094431146Pelobacter propionicus DSM 2379, complete genomehypothetical protein2e-25117
NC_002939:1866651:1874575187457518762451671Geobacter sulfurreducens PCA, complete genomeintegrative genetic element Gsu5, integrase2e-25116
NC_003911:1265972:1277271127727112788601590Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family1e-24114
NC_007643:791500:7959047959047970641161Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase2e-24113
NC_012918:1697860:1704183170418317054751293Geobacter sp. M21 chromosome, complete genomeintegrase family protein3e-24113
NC_007519:1782067:1787842178784217896921851Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein3e-23110
NC_013173:953633:9706779706779727402064Desulfomicrobium baculatum DSM 4028, complete genomeintegrase family protein3e-23109
NC_011146:1998981:2013194201319420144981305Geobacter bemidjiensis Bem, complete genomeintegrase family protein5e-23108
NC_011662:1160887:1170392117039211715971206Thauera sp. MZ1T, complete genomehypothetical protein2e-22107
NC_010688:3229820:3237928323792832394601533Xanthomonas campestris pv. campestris, complete genomephage-related integrase2e-22107
NC_003919:1716831:1744033174403317455651533Xanthomonas axonopodis pv. citri str. 306, complete genomephage-related integrase4e-22106
NC_014973:1941500:1955814195581419571001287Geobacter sp. M18 chromosome, complete genomeintegrase family protein7e-22105
NC_007643:3799425:3824154382415438258541701Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase8e-22105
NC_020409:584000:5846785846785863511674Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Phage integrase1e-21104
NC_009800:4529504:4532707453270745346561950Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family2e-21103
NC_016803:593484:5983485983486000871740Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein6e-21102
NC_014973:3452100:3471071347107134723601290Geobacter sp. M18 chromosome, complete genomeintegrase family protein5e-21102
NC_010682:460523:4937344937344950531320Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein4e-21102
NC_013421:3752619:3762474376247437644141941Pectobacterium wasabiae WPP163, complete genomeintegrase family protein1e-20101
NC_007946:289425:2952282952282971681941Escherichia coli UTI89, complete genomeputative integrase2e-20100
NC_014307:1619000:1623749162374916253741626Ralstonia solanacearum CFBP2957 chromosome, complete genomephage integrase2e-20100
NC_003919:1716831:1730204173020417315381335Xanthomonas axonopodis pv. citri str. 306, complete genomeintegrase1e-1997.8
NC_014153:2044500:2065464206546420667681305Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein1e-1997.4
NC_010804:2808676:2815315281531528166851371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase / tyrosine recombinase3e-1996.7
NC_009256:3056000:3062577306257730639471371Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase family protein3e-1996.7
NC_010084:695817:7080887080887094581371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein3e-1996.7
NC_011000:1023800:1035090103509010364601371Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage-related integrase3e-1996.7
NC_010688:1192410:1196622119662211981871566Xanthomonas campestris pv. campestris, complete genomephage-related integrase3e-1996.7
NC_007298:3764048:3776475377647537781541680Dechloromonas aromatica RCB, complete genomePhage integrase4e-1995.9
NC_010511:7024412:7031164703116470326931530Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein8e-1995.1
NC_003902:1858349:1882328188232818837761449Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related integrase9e-1995.1
NC_015381:3789661:3796625379662537982231599Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative phage-related integrase3e-1893.6
NC_015566:1127595:1135507113550711365861080Serratia sp. AS12 chromosome, complete genomeintegrase family protein3e-1893.2
NC_015567:1127780:1135692113569211367711080Serratia sp. AS9 chromosome, complete genomeintegrase family protein3e-1893.2
NC_007086:2887875:2931121293112129322631143Xanthomonas campestris pv. campestris str. 8004, complete genomephage-related integrase4e-1892.8
NC_014117:132524:1345211345211360951575Burkholderia sp. CCGE1002 chromosome chromosome 1, completehypothetical protein6e-1892
NC_013456:2528284:2536921253692125386211701Vibrio sp. Ex25 chromosome 1, complete genomeintegrase7e-1892
NC_009434:608765:6778376778376802902454Pseudomonas stutzeri A1501, complete genomehypothetical protein9e-1891.7
NC_017075:1674758:1676897167689716786241728Rubrivivax gelatinosus IL144, complete genomephage integrase family protein1e-1791.7
NC_010688:1192410:1205404120540412068521449Xanthomonas campestris pv. campestris, complete genomephage-related integrase1e-1791.3
NC_008702:815264:8306858306858323551671Azoarcus sp. BH72, complete genomeputative integrase2e-1790.5
NC_013361:3867558:3901815390181539034221608Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintegrase3e-1789.7
NC_010725:4618000:4625361462536146269831623Methylobacterium populi BJ001, complete genomelambda integrase-like/DNA breaking-rejoining enzyme, catalytic core5e-1789
NC_008782:1863853:1871054187105418726701617Acidovorax sp. JS42, complete genomephage integrase family protein5e-1789
NC_003198:3042000:3058163305816330598091647Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible integrase8e-1788.6
NC_009076:779407:7927997927997941571359Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-1687.4
NC_006350:845513:8574748574748588321359Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative phage-related integrase2e-1687.4
NC_007434:1001514:1016158101615810173961239Burkholderia pseudomallei 1710b chromosome I, complete sequenceputative phage-related integrase2e-1687
NC_014972:3604534:3621721362172136228721152Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein3e-1686.7
NC_009434:3611738:3619731361973136210711341Pseudomonas stutzeri A1501, complete genomeintegrase4e-1686.3
NC_014355:139324:1433791433791448211443Candidatus Nitrospira defluvii, complete genomeputative integrase1e-1584.7
AP010958:3474077:3504839350483935064641626Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative integrase1e-1584.3
NC_013353:3474077:3504839350483935064641626Escherichia coli O103:H2 str. 12009, complete genomeintegrase1e-1584.3
NC_017271:3641705:3684013368401336854131401Xanthomonas campestris pv. raphani 756C chromosome, completeintegrase1e-1584.3
NC_010688:3030873:3061417306141730628171401Xanthomonas campestris pv. campestris, complete genomephage-related integrase1e-1584.3
NC_016832:3020000:3032325303232530339441620Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Site-specific recombinase, phage integrase2e-1584
NC_004631:3030580:3043685304368530451481464Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-1583.6
NC_012808:58701:6196261962637671806Methylobacterium extorquens AM1, complete genomehypothetical protein3e-1583.6
NC_013716:5201097:5207462520746252091021641Citrobacter rodentium ICC168, complete genomeputative integrase3e-1583.2
NC_010688:3515885:3552388355238835537821395Xanthomonas campestris pv. campestris, complete genomephage-related integrase3e-1583.2
NC_010682:460523:4676864676864692871602Ralstonia pickettii 12J chromosome 1, complete sequencephage integrase6e-1582.4
NC_013855:56344:6317763177653152139Azospirillum sp. B510 plasmid pAB510a, complete sequenceintegrase6e-1582.4
NC_007508:3865000:3899877389987739010221146Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative phage-related integrase5e-1582.4
NC_011283:785973:7925257925257941651641Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase7e-1582
NC_016010:1822212:1855472185547218566231152Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeintegrase9e-1581.6
NC_016010:1169850:1180972118097211820451074Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeIntegrase XerC1e-1481.3
NC_009439:4661102:4664986466498646666801695Pseudomonas mendocina ymp, complete genomehypothetical protein9e-1478.6
NC_009720:216589:2196452196452212971653Xanthobacter autotrophicus Py2, complete genomeintegrase family protein1e-1378.2
NC_016585:116143:1196871196871216841998Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencehypothetical protein1e-1378.2
NC_010511:1641416:1641416164141616429631548Methylobacterium sp. 4-46 chromosome, complete genomeintegrase domain-containing protein4e-1376.3
NC_016010:1169850:1185584118558411871041521Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeIntegrase XerC5e-1375.9
NC_003902:1858349:1865420186542018668141395Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related integrase7e-1375.5
NC_015850:736680:7427277427277441751449Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein1e-1274.3
NC_016010:1822212:1827666182766618291471482Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeintegrase1e-1274.3
NC_008435:1215437:1217650121765012195841935Rhodopseudomonas palustris BisA53, complete genomephage integrase family protein3e-1273.6
NC_007508:1221500:1255730125573012572471518Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative integrase4e-1272.8
NC_009348:2034500:2041208204120820424731266Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase family site specific recombinase9e-1271.6
NC_012968:239476:2397482397482412021455Methylotenera mobilis JLW8, complete genomehypothetical protein1e-1171.2
NC_009256:2509806:2517264251726425185321269Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase domain/SAM domain-containing protein3e-1170.1
NC_015422:3366500:3376628337662833779141287Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein6e-1168.9
NC_003919:3812778:386330438633043864302999Xanthomonas axonopodis pv. citri str. 306, complete genomeintegrase1e-1067.8
NC_010511:915313:9290119290119306001590Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein7e-1065.5
NC_009485:7021228:7039994703999470418501857Bradyrhizobium sp. BTAi1 chromosome, complete genomelambda integrase-like/ DNA breaking-rejoining enzyme, catalytic core7e-1065.5
NC_013209:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-01, complete genomephage integrase3e-0963.5
NC_017100:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-03, complete genomephage integrase3e-0963.5
NC_017108:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-12, complete genomephage integrase3e-0963.5
NC_017111:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-32, complete genomephage integrase3e-0963.5
NC_017121:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-07, complete genomephage integrase3e-0963.5
NC_017125:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-22, complete genomephage integrase3e-0963.5
NC_017146:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-26, complete genomephage integrase3e-0963.5
NC_017150:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-01-42C, complete genomephage integrase3e-0963.5
NC_007951:570500:5772355772355786531419Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein3e-0963.2
NC_011757:4293000:4318726431872643204951770Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein5e-0962.8
NC_015850:1006980:1027150102715010289371788Acidithiobacillus caldus SM-1 chromosome, complete genomephage integrase2e-0860.8
NC_012660:1579204:1604792160479216062341443Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase3e-0860.1
NC_010084:2674972:2682560268256026845151956Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein3e-0860.1
NC_010804:831000:8402588402588422131956Burkholderia multivorans ATCC 17616 chromosome 1, completetyrosine recombinase3e-0860.1
NC_010725:356609:3691903691903708721683Methylobacterium populi BJ001, complete genomeintegrase family protein3e-0859.7
NC_016027:1902854:1915181191518119164671287Gluconacetobacter xylinus NBRC 3288, complete genomephage integrase8e-0858.5
NC_010338:1394550:1401072140107214028381767Caulobacter sp. K31, complete genomehypothetical protein2e-0757.4
NC_013446:4281250:4294269429426942959961728Comamonas testosteroni CNB-2, complete genomePhage integerase2e-0757
NC_009456:787322:7927647927647941311368Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein5e-0756.2
NC_007508:1221500:1227118122711812285991482Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative integrase9e-0755.1
NC_004603:2235142:2240007224000722413441338Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein2e-0654.3
NC_011000:3362382:3368967336896733707271761Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative integrase3e-0653.5
NC_008347:1636660:1655238165523816569861749Maricaulis maris MCS10, complete genomephage integrase family protein5e-0652.8
NC_012988:769981:7742397742397755941356Methylobacterium extorquens DM4, complete genomephage integrase5e-0652.8